G1450071


Basic Information

Item Value
gene id G1450071
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 41390006 ~ 41390214 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1659400
AATAGCATCAACAAGTAATCTAAGTTGAATCAGTCTGTAACATGTCAAAGTTGGTTTGGTGTTTGTAGCTTTAATGGTTCAAGAGCAGTGGCAAATCCAAATACTTACCATTCAAGCCTATGGAGCTTTTATGCACATTTAAAACAGTTATAGTTCAAAAAGTATAAATGGCATCAAAAAGCTGTATACACAAGCACACTATTCTAGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1659400 True 209 lncRNA 0.34 1 41390006 41390214

Neighbor

gene id symbol gene type direction distance location
LOC110493893 cdh22 coding upstream 305187 40767465 ~ 41084819 (+)
LOC110493184 LOC106565288 coding upstream 915317 40448527 ~ 40474689 (+)
LOC118940426 LOC106565291 coding upstream 1004586 40383185 ~ 40385420 (+)
LOC118940425 dnttip1 coding upstream 1011057 40367757 ~ 40378949 (+)
LOC110493889 LOC106565080 coding upstream 1022266 40312876 ~ 40367740 (+)
LOC110493894 LOC106565283 coding downstream 139959 41530173 ~ 41547714 (+)
LOC110493897 LOC106565282 coding downstream 251660 41641874 ~ 41706180 (+)
LOC110493901 LOC106565279 coding downstream 432148 41822362 ~ 41887681 (+)
LOC110493904 LOC106565276 coding downstream 639776 42029990 ~ 42108742 (+)
LOC110493907 LOC106565273 coding downstream 939351 42329565 ~ 42407845 (+)
G1449866 NA non-coding upstream 151862 41237833 ~ 41238144 (+)
G1449860 NA non-coding upstream 157916 41231885 ~ 41232090 (+)
G1449858 NA non-coding upstream 158192 41231585 ~ 41231814 (+)
G1449847 NA non-coding upstream 167319 41222481 ~ 41222687 (+)
G1449823 NA non-coding upstream 179912 41209779 ~ 41210094 (+)
G1450093 NA non-coding downstream 19407 41409621 ~ 41409857 (+)
G1450363 LOC106565281 non-coding downstream 339210 41729424 ~ 41730184 (+)
G1450384 NA non-coding downstream 366515 41756729 ~ 41759882 (+)
G1450421 NA non-coding downstream 406862 41797076 ~ 41798952 (+)
G1450425 NA non-coding downstream 413635 41803849 ~ 41804516 (+)
G1447998 NA other upstream 1589770 39799936 ~ 39800236 (+)
pmepa1 pmepa1 other upstream 1963106 39342991 ~ 39426900 (+)
G1446149 NA other upstream 3079142 38309129 ~ 38310864 (+)
rbl1 rbl1 other upstream 3801279 37538220 ~ 37588797 (+)
G1450387 NA other downstream 402669 41792883 ~ 41890515 (+)
G1451948 LOC570405 other downstream 1938372 43328586 ~ 43459832 (+)
G1451956 LOC106958509 other downstream 1938885 43329099 ~ 43409816 (+)
G1452359 NA other downstream 2092046 43482260 ~ 43483693 (+)

Expression


Co-expression Network