Gene
RNA
| Item | Value |
|---|---|
| gene id | G1450093 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 41409621 ~ 41409857 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1659422 | True | 237 | lncRNA | 0.49 | 1 | 41409621 | 41409857 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110493893 | cdh22 | coding | upstream | 324802 | 40767465 ~ 41084819 (+) |
| LOC110493184 | LOC106565288 | coding | upstream | 934932 | 40448527 ~ 40474689 (+) |
| LOC118940426 | LOC106565291 | coding | upstream | 1024201 | 40383185 ~ 40385420 (+) |
| LOC118940425 | dnttip1 | coding | upstream | 1030672 | 40367757 ~ 40378949 (+) |
| LOC110493889 | LOC106565080 | coding | upstream | 1041881 | 40312876 ~ 40367740 (+) |
| LOC110493894 | LOC106565283 | coding | downstream | 120316 | 41530173 ~ 41547714 (+) |
| LOC110493897 | LOC106565282 | coding | downstream | 232017 | 41641874 ~ 41706180 (+) |
| LOC110493901 | LOC106565279 | coding | downstream | 412505 | 41822362 ~ 41887681 (+) |
| LOC110493904 | LOC106565276 | coding | downstream | 620133 | 42029990 ~ 42108742 (+) |
| LOC110493907 | LOC106565273 | coding | downstream | 919708 | 42329565 ~ 42407845 (+) |
| G1450071 | NA | non-coding | upstream | 19407 | 41390006 ~ 41390214 (+) |
| G1449866 | NA | non-coding | upstream | 171477 | 41237833 ~ 41238144 (+) |
| G1449860 | NA | non-coding | upstream | 177531 | 41231885 ~ 41232090 (+) |
| G1449858 | NA | non-coding | upstream | 177807 | 41231585 ~ 41231814 (+) |
| G1449847 | NA | non-coding | upstream | 186934 | 41222481 ~ 41222687 (+) |
| G1450363 | LOC106565281 | non-coding | downstream | 319567 | 41729424 ~ 41730184 (+) |
| G1450384 | NA | non-coding | downstream | 346872 | 41756729 ~ 41759882 (+) |
| G1450421 | NA | non-coding | downstream | 387219 | 41797076 ~ 41798952 (+) |
| G1450425 | NA | non-coding | downstream | 393992 | 41803849 ~ 41804516 (+) |
| G1450385 | NA | non-coding | downstream | 478214 | 41888071 ~ 41889157 (+) |
| G1447998 | NA | other | upstream | 1609385 | 39799936 ~ 39800236 (+) |
| pmepa1 | pmepa1 | other | upstream | 1982721 | 39342991 ~ 39426900 (+) |
| G1446149 | NA | other | upstream | 3098757 | 38309129 ~ 38310864 (+) |
| rbl1 | rbl1 | other | upstream | 3820894 | 37538220 ~ 37588797 (+) |
| G1450387 | NA | other | downstream | 383026 | 41792883 ~ 41890515 (+) |
| G1451948 | LOC570405 | other | downstream | 1918729 | 43328586 ~ 43459832 (+) |
| G1451956 | LOC106958509 | other | downstream | 1919242 | 43329099 ~ 43409816 (+) |
| G1452359 | NA | other | downstream | 2072403 | 43482260 ~ 43483693 (+) |
