Gene
RNA
| Item | Value |
|---|---|
| gene id | G1450385 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 41888071 ~ 41889157 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1659719 | True | 1050 | lncRNA | 0.38 | 2 | 41888071 | 41889157 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110493901 | LOC106565279 | coding | upstream | 390 | 41822362 ~ 41887681 (+) |
| LOC110493897 | LOC106565282 | coding | upstream | 181891 | 41641874 ~ 41706180 (+) |
| LOC110493894 | LOC106565283 | coding | upstream | 340357 | 41530173 ~ 41547714 (+) |
| LOC110493893 | cdh22 | coding | upstream | 803252 | 40767465 ~ 41084819 (+) |
| LOC110493184 | LOC106565288 | coding | upstream | 1413382 | 40448527 ~ 40474689 (+) |
| LOC110493904 | LOC106565276 | coding | downstream | 140833 | 42029990 ~ 42108742 (+) |
| LOC110493907 | LOC106565273 | coding | downstream | 440408 | 42329565 ~ 42407845 (+) |
| LOC110493908 | LOC106565271 | coding | downstream | 546171 | 42435328 ~ 42516956 (+) |
| LOC110493909 | arfrp | coding | downstream | 639592 | 42528749 ~ 42532546 (+) |
| LOC110493911 | LOC106565269 | coding | downstream | 710563 | 42599720 ~ 42632365 (+) |
| G1450425 | NA | non-coding | upstream | 83555 | 41803849 ~ 41804516 (+) |
| G1450421 | NA | non-coding | upstream | 89119 | 41797076 ~ 41798952 (+) |
| G1450384 | NA | non-coding | upstream | 128189 | 41756729 ~ 41759882 (+) |
| G1450363 | LOC106565281 | non-coding | upstream | 157887 | 41729424 ~ 41730184 (+) |
| G1450093 | NA | non-coding | upstream | 478214 | 41409621 ~ 41409857 (+) |
| G1450462 | NA | non-coding | downstream | 1488 | 41890645 ~ 41894245 (+) |
| G1450473 | NA | non-coding | downstream | 27832 | 41916989 ~ 41917232 (+) |
| G1450474 | NA | non-coding | downstream | 28339 | 41917496 ~ 41917805 (+) |
| G1450487 | NA | non-coding | downstream | 56308 | 41945465 ~ 41945755 (+) |
| G1450488 | NA | non-coding | downstream | 57132 | 41946289 ~ 41946496 (+) |
| G1447998 | NA | other | upstream | 2087835 | 39799936 ~ 39800236 (+) |
| pmepa1 | pmepa1 | other | upstream | 2461171 | 39342991 ~ 39426900 (+) |
| G1446149 | NA | other | upstream | 3577207 | 38309129 ~ 38310864 (+) |
| G1451948 | LOC570405 | other | downstream | 1439429 | 43328586 ~ 43459832 (+) |
| G1451956 | LOC106958509 | other | downstream | 1439942 | 43329099 ~ 43409816 (+) |
| G1452359 | NA | other | downstream | 1593103 | 43482260 ~ 43483693 (+) |
| G1452362 | NA | other | downstream | 1602017 | 43491174 ~ 43492068 (+) |
| G1452369 | NA | other | downstream | 1652507 | 43508719 ~ 43565770 (+) |
