G1450474


Basic Information

Item Value
gene id G1450474
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 41917496 ~ 41917805 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1659819
cggagtcagaggccgagtcttctctggtctctactcctcccgttacggggtctgagacgccgaagcttcccaccattagctctgacaaattcaaaactctagtcattggcgactccattaccgcagtattagacttaaaacgaatcatccagcgatcatacactgtttaccggggggcaaggcaaccgacgttaaggctaatctgaagatggtgctggctaaagctaaaactggcgagtgtagagagtatagagatattgttatccacgtcggcaccaacgatgttaggatgaaacagtcagagatcacc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1659819 True 310 lncRNA 0.49 1 41917496 41917805

Neighbor

gene id symbol gene type direction distance location
LOC110493901 LOC106565279 coding upstream 29815 41822362 ~ 41887681 (+)
LOC110493897 LOC106565282 coding upstream 211316 41641874 ~ 41706180 (+)
LOC110493894 LOC106565283 coding upstream 369782 41530173 ~ 41547714 (+)
LOC110493893 cdh22 coding upstream 832677 40767465 ~ 41084819 (+)
LOC110493184 LOC106565288 coding upstream 1442807 40448527 ~ 40474689 (+)
LOC110493904 LOC106565276 coding downstream 112185 42029990 ~ 42108742 (+)
LOC110493907 LOC106565273 coding downstream 411760 42329565 ~ 42407845 (+)
LOC110493908 LOC106565271 coding downstream 517523 42435328 ~ 42516956 (+)
LOC110493909 arfrp coding downstream 610944 42528749 ~ 42532546 (+)
LOC110493911 LOC106565269 coding downstream 681915 42599720 ~ 42632365 (+)
G1450473 NA non-coding upstream 264 41916989 ~ 41917232 (+)
G1450462 NA non-coding upstream 23251 41890645 ~ 41894245 (+)
G1450385 NA non-coding upstream 28339 41888071 ~ 41889157 (+)
G1450425 NA non-coding upstream 112980 41803849 ~ 41804516 (+)
G1450421 NA non-coding upstream 118544 41797076 ~ 41798952 (+)
G1450487 NA non-coding downstream 27660 41945465 ~ 41945755 (+)
G1450488 NA non-coding downstream 28484 41946289 ~ 41946496 (+)
G1450489 NA non-coding downstream 28889 41946694 ~ 41946947 (+)
G1450490 LOC106565304 non-coding downstream 29685 41947490 ~ 41948989 (+)
G1450857 NA non-coding downstream 99407 42017212 ~ 42017449 (+)
G1450387 NA other upstream 26981 41792883 ~ 41890515 (+)
G1447998 NA other upstream 2117260 39799936 ~ 39800236 (+)
pmepa1 pmepa1 other upstream 2490596 39342991 ~ 39426900 (+)
G1451948 LOC570405 other downstream 1410781 43328586 ~ 43459832 (+)
G1451956 LOC106958509 other downstream 1411294 43329099 ~ 43409816 (+)
G1452359 NA other downstream 1564455 43482260 ~ 43483693 (+)
G1452362 NA other downstream 1573369 43491174 ~ 43492068 (+)
G1452369 NA other downstream 1623859 43508719 ~ 43565770 (+)

Expression


Co-expression Network