G1450487


Basic Information

Item Value
gene id G1450487
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 41945465 ~ 41945755 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1659832
gcccttgctgatggaaggttttcactcaaaatctcatgtttcatggccccattcattctttcctttacacggatcagtcctcctggtccctttgcagaaaaacagcaccaaagcatgatgtttccacccccatgcttcacagtaggcatggtgttctttggatgcaactcagcattctttgtcctccaaacacgacgagttgagtttttaccaaaaagttatattttggcttcatctgaccatatgacattctcccaatcttctttggatcatccaaatgctctctagcaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1659832 True 291 lncRNA 0.43 1 41945465 41945755

Neighbor

gene id symbol gene type direction distance location
LOC110493901 LOC106565279 coding upstream 57784 41822362 ~ 41887681 (+)
LOC110493897 LOC106565282 coding upstream 239285 41641874 ~ 41706180 (+)
LOC110493894 LOC106565283 coding upstream 397751 41530173 ~ 41547714 (+)
LOC110493893 cdh22 coding upstream 860646 40767465 ~ 41084819 (+)
LOC110493184 LOC106565288 coding upstream 1470776 40448527 ~ 40474689 (+)
LOC110493904 LOC106565276 coding downstream 84235 42029990 ~ 42108742 (+)
LOC110493907 LOC106565273 coding downstream 383810 42329565 ~ 42407845 (+)
LOC110493908 LOC106565271 coding downstream 489573 42435328 ~ 42516956 (+)
LOC110493909 arfrp coding downstream 582994 42528749 ~ 42532546 (+)
LOC110493911 LOC106565269 coding downstream 653965 42599720 ~ 42632365 (+)
G1450474 NA non-coding upstream 27660 41917496 ~ 41917805 (+)
G1450473 NA non-coding upstream 28233 41916989 ~ 41917232 (+)
G1450462 NA non-coding upstream 51220 41890645 ~ 41894245 (+)
G1450385 NA non-coding upstream 56308 41888071 ~ 41889157 (+)
G1450425 NA non-coding upstream 140949 41803849 ~ 41804516 (+)
G1450488 NA non-coding downstream 534 41946289 ~ 41946496 (+)
G1450489 NA non-coding downstream 939 41946694 ~ 41946947 (+)
G1450490 LOC106565304 non-coding downstream 1735 41947490 ~ 41948989 (+)
G1450857 NA non-coding downstream 71457 42017212 ~ 42017449 (+)
G1450858 NA non-coding downstream 72261 42018016 ~ 42018235 (+)
G1450387 NA other upstream 54950 41792883 ~ 41890515 (+)
G1447998 NA other upstream 2145229 39799936 ~ 39800236 (+)
pmepa1 pmepa1 other upstream 2518565 39342991 ~ 39426900 (+)
G1451948 LOC570405 other downstream 1382831 43328586 ~ 43459832 (+)
G1451956 LOC106958509 other downstream 1383344 43329099 ~ 43409816 (+)
G1452359 NA other downstream 1536505 43482260 ~ 43483693 (+)
G1452362 NA other downstream 1545419 43491174 ~ 43492068 (+)
G1452369 NA other downstream 1595909 43508719 ~ 43565770 (+)

Expression


Co-expression Network