G1450857


Basic Information

Item Value
gene id G1450857
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 42017212 ~ 42017449 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1660218
TTTATGTAGTGGACTGTCAAACTGACCATAGATTGGCTATGGTGGAAAAATAAGAAACACTAGCCAGCTTCTCTGAGACCCTTTTGCGGGTAGCAGTGTATAATCGCGGCAGGGCTTCTTCCGTGAAATACTTGCGGCTTGGCAGCTGATATTTGTGGTCAACTGTAACTAGCATATTTTTAAAGCTTGGCTTTTCTACCGTAAAGATTGGGACCGTATCTTTCACTATGTAATAGGT

Function

NR:

description
zinc finger BED domain-containing protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1660218 True 238 lncRNA 0.42 1 42017212 42017449

Neighbor

gene id symbol gene type direction distance location
LOC110493901 LOC106565279 coding upstream 129531 41822362 ~ 41887681 (+)
LOC110493897 LOC106565282 coding upstream 311032 41641874 ~ 41706180 (+)
LOC110493894 LOC106565283 coding upstream 469498 41530173 ~ 41547714 (+)
LOC110493893 cdh22 coding upstream 932393 40767465 ~ 41084819 (+)
LOC110493184 LOC106565288 coding upstream 1542523 40448527 ~ 40474689 (+)
LOC110493904 LOC106565276 coding downstream 12541 42029990 ~ 42108742 (+)
LOC110493907 LOC106565273 coding downstream 312116 42329565 ~ 42407845 (+)
LOC110493908 LOC106565271 coding downstream 417879 42435328 ~ 42516956 (+)
LOC110493909 arfrp coding downstream 511300 42528749 ~ 42532546 (+)
LOC110493911 LOC106565269 coding downstream 582271 42599720 ~ 42632365 (+)
G1450490 LOC106565304 non-coding upstream 68223 41947490 ~ 41948989 (+)
G1450489 NA non-coding upstream 70265 41946694 ~ 41946947 (+)
G1450488 NA non-coding upstream 70716 41946289 ~ 41946496 (+)
G1450487 NA non-coding upstream 71457 41945465 ~ 41945755 (+)
G1450474 NA non-coding upstream 99407 41917496 ~ 41917805 (+)
G1450858 NA non-coding downstream 567 42018016 ~ 42018235 (+)
G1450872 NA non-coding downstream 10268 42027717 ~ 42028089 (+)
G1450997 NA non-coding downstream 95275 42112724 ~ 42112950 (+)
G1451028 NA non-coding downstream 120008 42137457 ~ 42138842 (+)
G1451191 NA non-coding downstream 348877 42366326 ~ 42366548 (+)
G1450387 NA other upstream 126697 41792883 ~ 41890515 (+)
G1447998 NA other upstream 2216976 39799936 ~ 39800236 (+)
pmepa1 pmepa1 other upstream 2590312 39342991 ~ 39426900 (+)
G1451948 LOC570405 other downstream 1311137 43328586 ~ 43459832 (+)
G1451956 LOC106958509 other downstream 1311650 43329099 ~ 43409816 (+)
G1452359 NA other downstream 1464811 43482260 ~ 43483693 (+)
G1452362 NA other downstream 1473725 43491174 ~ 43492068 (+)
G1452369 NA other downstream 1524215 43508719 ~ 43565770 (+)

Expression


Co-expression Network