G1450858


Basic Information

Item Value
gene id G1450858
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 42018016 ~ 42018235 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1660219
ctatgcaatctggtttcagagctggtcatgggtgcacctcagccacgctcaaggttctaaacgatatcttaaccgccatcgataagaaacaatactgtgcagccatattcattgacctggccaaggctttcgactctgtcaatcaccacatccccATCggaagactcaacagccttggtttctcaaatgattgcctcgcctggttcaccaactacttctc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1660219 True 220 lncRNA 0.48 1 42018016 42018235

Neighbor

gene id symbol gene type direction distance location
LOC110493901 LOC106565279 coding upstream 130335 41822362 ~ 41887681 (+)
LOC110493897 LOC106565282 coding upstream 311836 41641874 ~ 41706180 (+)
LOC110493894 LOC106565283 coding upstream 470302 41530173 ~ 41547714 (+)
LOC110493893 cdh22 coding upstream 933197 40767465 ~ 41084819 (+)
LOC110493184 LOC106565288 coding upstream 1543327 40448527 ~ 40474689 (+)
LOC110493904 LOC106565276 coding downstream 11755 42029990 ~ 42108742 (+)
LOC110493907 LOC106565273 coding downstream 311330 42329565 ~ 42407845 (+)
LOC110493908 LOC106565271 coding downstream 417093 42435328 ~ 42516956 (+)
LOC110493909 arfrp coding downstream 510514 42528749 ~ 42532546 (+)
LOC110493911 LOC106565269 coding downstream 581485 42599720 ~ 42632365 (+)
G1450857 NA non-coding upstream 567 42017212 ~ 42017449 (+)
G1450490 LOC106565304 non-coding upstream 69027 41947490 ~ 41948989 (+)
G1450489 NA non-coding upstream 71069 41946694 ~ 41946947 (+)
G1450488 NA non-coding upstream 71520 41946289 ~ 41946496 (+)
G1450487 NA non-coding upstream 72261 41945465 ~ 41945755 (+)
G1450872 NA non-coding downstream 9482 42027717 ~ 42028089 (+)
G1450997 NA non-coding downstream 94489 42112724 ~ 42112950 (+)
G1451028 NA non-coding downstream 119222 42137457 ~ 42138842 (+)
G1451191 NA non-coding downstream 348091 42366326 ~ 42366548 (+)
G1451192 NA non-coding downstream 348887 42367122 ~ 42367442 (+)
G1450387 NA other upstream 127501 41792883 ~ 41890515 (+)
G1447998 NA other upstream 2217780 39799936 ~ 39800236 (+)
pmepa1 pmepa1 other upstream 2591116 39342991 ~ 39426900 (+)
G1451948 LOC570405 other downstream 1310351 43328586 ~ 43459832 (+)
G1451956 LOC106958509 other downstream 1310864 43329099 ~ 43409816 (+)
G1452359 NA other downstream 1464025 43482260 ~ 43483693 (+)
G1452362 NA other downstream 1472939 43491174 ~ 43492068 (+)
G1452369 NA other downstream 1523429 43508719 ~ 43565770 (+)

Expression


Co-expression Network