G1450997


Basic Information

Item Value
gene id G1450997
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 42112724 ~ 42112950 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1660365
aatgaatttattagcaaattatggtggaaaataagtatttggtcacctacaaacaagcaagatttctggctctcacagacctgtaacttcttctttacgaggctcctctgtcctccactcattacctgtattaatggcacctgtttgaacttgaacTTGATAACGAGCATCCGGACTGAACTGTCAGCTCGTTTTTGCTCACCGGGTAAGGCTGTCCAACAGCTCCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1660365 True 227 lncRNA 0.43 1 42112724 42112950

Neighbor

gene id symbol gene type direction distance location
LOC110493904 LOC106565276 coding upstream 3982 42029990 ~ 42108742 (+)
LOC110493901 LOC106565279 coding upstream 225043 41822362 ~ 41887681 (+)
LOC110493897 LOC106565282 coding upstream 406544 41641874 ~ 41706180 (+)
LOC110493894 LOC106565283 coding upstream 565010 41530173 ~ 41547714 (+)
LOC110493893 cdh22 coding upstream 1027905 40767465 ~ 41084819 (+)
LOC110493907 LOC106565273 coding downstream 216615 42329565 ~ 42407845 (+)
LOC110493908 LOC106565271 coding downstream 322378 42435328 ~ 42516956 (+)
LOC110493909 arfrp coding downstream 415799 42528749 ~ 42532546 (+)
LOC110493911 LOC106565269 coding downstream 486770 42599720 ~ 42632365 (+)
LOC110493912 LOC106565266 coding downstream 627428 42740378 ~ 42762109 (+)
G1450872 NA non-coding upstream 84635 42027717 ~ 42028089 (+)
G1450858 NA non-coding upstream 94489 42018016 ~ 42018235 (+)
G1450857 NA non-coding upstream 95275 42017212 ~ 42017449 (+)
G1450490 LOC106565304 non-coding upstream 163735 41947490 ~ 41948989 (+)
G1450489 NA non-coding upstream 165777 41946694 ~ 41946947 (+)
G1451028 NA non-coding downstream 24507 42137457 ~ 42138842 (+)
G1451191 NA non-coding downstream 253376 42366326 ~ 42366548 (+)
G1451192 NA non-coding downstream 254172 42367122 ~ 42367442 (+)
G1451193 NA non-coding downstream 254524 42367474 ~ 42367719 (+)
G1451195 NA non-coding downstream 271777 42384727 ~ 42384971 (+)
G1450387 NA other upstream 222209 41792883 ~ 41890515 (+)
G1447998 NA other upstream 2312488 39799936 ~ 39800236 (+)
pmepa1 pmepa1 other upstream 2685824 39342991 ~ 39426900 (+)
G1451948 LOC570405 other downstream 1215636 43328586 ~ 43459832 (+)
G1451956 LOC106958509 other downstream 1216149 43329099 ~ 43409816 (+)
G1452359 NA other downstream 1369310 43482260 ~ 43483693 (+)
G1452362 NA other downstream 1378224 43491174 ~ 43492068 (+)
G1452369 NA other downstream 1428714 43508719 ~ 43565770 (+)

Expression


Co-expression Network