Gene
RNA
| Item | Value |
|---|---|
| gene id | G1451179 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 42410730 ~ 42411333 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1660551 | True | 604 | lncRNA | 0.35 | 1 | 42410730 | 42411333 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110493907 | LOC106565273 | coding | upstream | 2885 | 42329565 ~ 42407845 (+) |
| LOC110493904 | LOC106565276 | coding | upstream | 301988 | 42029990 ~ 42108742 (+) |
| LOC110493901 | LOC106565279 | coding | upstream | 523049 | 41822362 ~ 41887681 (+) |
| LOC110493897 | LOC106565282 | coding | upstream | 704550 | 41641874 ~ 41706180 (+) |
| LOC110493894 | LOC106565283 | coding | upstream | 863016 | 41530173 ~ 41547714 (+) |
| LOC110493908 | LOC106565271 | coding | downstream | 23995 | 42435328 ~ 42516956 (+) |
| LOC110493909 | arfrp | coding | downstream | 117416 | 42528749 ~ 42532546 (+) |
| LOC110493911 | LOC106565269 | coding | downstream | 188387 | 42599720 ~ 42632365 (+) |
| LOC110493912 | LOC106565266 | coding | downstream | 329045 | 42740378 ~ 42762109 (+) |
| LOC110493915 | LOC106565264 | coding | downstream | 358972 | 42770305 ~ 42776295 (+) |
| G1451195 | NA | non-coding | upstream | 25759 | 42384727 ~ 42384971 (+) |
| G1451193 | NA | non-coding | upstream | 43011 | 42367474 ~ 42367719 (+) |
| G1451192 | NA | non-coding | upstream | 43288 | 42367122 ~ 42367442 (+) |
| G1451191 | NA | non-coding | upstream | 44182 | 42366326 ~ 42366548 (+) |
| G1451200 | NA | non-coding | downstream | 2743 | 42414076 ~ 42414286 (+) |
| G1451201 | NA | non-coding | downstream | 3595 | 42414928 ~ 42415255 (+) |
| G1451210 | NA | non-coding | downstream | 14300 | 42425633 ~ 42425865 (+) |
| G1451534 | NA | non-coding | downstream | 130756 | 42542089 ~ 42542319 (+) |
| G1451551 | LOC106565270 | non-coding | downstream | 152612 | 42563945 ~ 42588386 (+) |
| G1450387 | NA | other | upstream | 520215 | 41792883 ~ 41890515 (+) |
| LOC110493893 | cdh22 | other | upstream | 1442664 | 40767465 ~ 41084819 (+) |
| G1447998 | NA | other | upstream | 2610494 | 39799936 ~ 39800236 (+) |
| pmepa1 | pmepa1 | other | upstream | 2983830 | 39342991 ~ 39426900 (+) |
| G1451948 | LOC570405 | other | downstream | 917253 | 43328586 ~ 43459832 (+) |
| G1451956 | LOC106958509 | other | downstream | 917766 | 43329099 ~ 43409816 (+) |
| G1452359 | NA | other | downstream | 1070927 | 43482260 ~ 43483693 (+) |
| G1452362 | NA | other | downstream | 1079841 | 43491174 ~ 43492068 (+) |
| G1452369 | NA | other | downstream | 1130331 | 43508719 ~ 43565770 (+) |
