G1451777



Basic Information


Item Value
gene id G1451777
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 42724219 ~ 42724456 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1661184
caaacagtgcaacccaggctacctaagtatgattctcaatcagtgacaactaatgacacctgcctctgattgagaaccatactaggccgaaacatagaaatgccccaaaacatagaaaaacaaacatagcctgcccacccaactcacgccctgaccatactaaataaatacaaaacaaaggaaataaaggtcagaacgtgacaggttaaatcttcctagaagtgacaCAGGGTTGGAG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1661184 True 238 lncRNA 0.42 1 42724219 42724456

Neighbor


gene id symbol gene type direction distance location
LOC110493911 LOC106565269 coding upstream 91854 42599720 ~ 42632365 (+)
LOC110493909 arfrp coding upstream 191673 42528749 ~ 42532546 (+)
LOC110493908 LOC106565271 coding upstream 207263 42435328 ~ 42516956 (+)
LOC110493907 LOC106565273 coding upstream 316374 42329565 ~ 42407845 (+)
LOC110493904 LOC106565276 coding upstream 615477 42029990 ~ 42108742 (+)
LOC110493912 LOC106565266 coding downstream 15922 42740378 ~ 42762109 (+)
LOC110493915 LOC106565264 coding downstream 45849 42770305 ~ 42776295 (+)
LOC110493924 LOC106591969 coding downstream 226072 42950528 ~ 42952198 (+)
LOC110493836 LOC106565017 coding downstream 535710 43260166 ~ 43270260 (+)
LOC118940459 NA coding downstream 595341 43319797 ~ 43330019 (+)
G1451776 NA non-coding upstream 4 42724011 ~ 42724215 (+)
G1451578 NA non-coding upstream 26499 42637223 ~ 42697720 (+)
G1451606 NA non-coding upstream 54968 42668664 ~ 42669251 (+)
G1451549 NA non-coding upstream 87911 42632668 ~ 42636308 (+)
G1451562 NA non-coding upstream 132284 42591716 ~ 42591935 (+)
G1451784 NA non-coding downstream 5146 42729602 ~ 42729802 (+)
G1451805 NA non-coding downstream 28626 42753082 ~ 42764226 (+)
G1451810 NA non-coding downstream 31828 42756284 ~ 42812736 (+)
G1451817 LOC106565263 non-coding downstream 65180 42789636 ~ 42790325 (+)
G1451838 NA non-coding downstream 92089 42816545 ~ 42816745 (+)
G1450387 NA other upstream 833704 41792883 ~ 41890515 (+)
LOC110493897 LOC106565282 other upstream 1030501 41641874 ~ 41706180 (+)
LOC110493893 cdh22 other upstream 1756153 40767465 ~ 41084819 (+)
G1447998 NA other upstream 2923983 39799936 ~ 39800236 (+)
pmepa1 pmepa1 other upstream 3297319 39342991 ~ 39426900 (+)
G1451948 LOC570405 other downstream 604130 43328586 ~ 43459832 (+)
G1451956 LOC106958509 other downstream 604643 43329099 ~ 43409816 (+)
G1452359 NA other downstream 757804 43482260 ~ 43483693 (+)
G1452362 NA other downstream 766718 43491174 ~ 43492068 (+)
G1452369 NA other downstream 817208 43508719 ~ 43565770 (+)

Expression



Co-expression Network