Gene
RNA
| Item | Value |
|---|---|
| gene id | G1451805 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 42753082 ~ 42764226 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1661212 | True | 1167 | lncRNA | 0.34 | 2 | 42753082 | 42764226 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110493911 | LOC106565269 | coding | upstream | 120717 | 42599720 ~ 42632365 (+) |
| LOC110493909 | arfrp | coding | upstream | 220536 | 42528749 ~ 42532546 (+) |
| LOC110493908 | LOC106565271 | coding | upstream | 236126 | 42435328 ~ 42516956 (+) |
| LOC110493907 | LOC106565273 | coding | upstream | 345237 | 42329565 ~ 42407845 (+) |
| LOC110493904 | LOC106565276 | coding | upstream | 644340 | 42029990 ~ 42108742 (+) |
| LOC110493915 | LOC106565264 | coding | downstream | 6079 | 42770305 ~ 42776295 (+) |
| LOC110493924 | LOC106591969 | coding | downstream | 186302 | 42950528 ~ 42952198 (+) |
| LOC110493836 | LOC106565017 | coding | downstream | 495940 | 43260166 ~ 43270260 (+) |
| LOC118940459 | NA | coding | downstream | 555571 | 43319797 ~ 43330019 (+) |
| LOC118940518 | NA | coding | downstream | 559302 | 43323528 ~ 43323647 (+) |
| G1451784 | NA | non-coding | upstream | 23280 | 42729602 ~ 42729802 (+) |
| G1451777 | NA | non-coding | upstream | 28626 | 42724219 ~ 42724456 (+) |
| G1451776 | NA | non-coding | upstream | 28867 | 42724011 ~ 42724215 (+) |
| G1451578 | NA | non-coding | upstream | 55362 | 42637223 ~ 42697720 (+) |
| G1451606 | NA | non-coding | upstream | 83831 | 42668664 ~ 42669251 (+) |
| G1451817 | LOC106565263 | non-coding | downstream | 25410 | 42789636 ~ 42790325 (+) |
| G1451838 | NA | non-coding | downstream | 52319 | 42816545 ~ 42816745 (+) |
| G1451842 | NA | non-coding | downstream | 58646 | 42822872 ~ 42823113 (+) |
| G1451851 | NA | non-coding | downstream | 66970 | 42831196 ~ 42831396 (+) |
| G1451832 | NA | non-coding | downstream | 74447 | 42838673 ~ 42866761 (+) |
| G1450387 | NA | other | upstream | 862567 | 41792883 ~ 41890515 (+) |
| LOC110493897 | LOC106565282 | other | upstream | 1059364 | 41641874 ~ 41706180 (+) |
| LOC110493893 | cdh22 | other | upstream | 1785016 | 40767465 ~ 41084819 (+) |
| G1447998 | NA | other | upstream | 2952846 | 39799936 ~ 39800236 (+) |
| pmepa1 | pmepa1 | other | upstream | 3326182 | 39342991 ~ 39426900 (+) |
| G1451948 | LOC570405 | other | downstream | 564360 | 43328586 ~ 43459832 (+) |
| G1451956 | LOC106958509 | other | downstream | 564873 | 43329099 ~ 43409816 (+) |
| G1452359 | NA | other | downstream | 718034 | 43482260 ~ 43483693 (+) |
| G1452362 | NA | other | downstream | 726948 | 43491174 ~ 43492068 (+) |
| G1452369 | NA | other | downstream | 777438 | 43508719 ~ 43565770 (+) |
