G1451838



Basic Information


Item Value
gene id G1451838
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 42816545 ~ 42816745 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1661250
TGCTGGAGGGGATCAAGCCCTCCACTTTCTCTaaatacgtcccaaatggcaccctattccctatatagtgcactacttgtgatgGGCCttggtcatttgggatgcaatcacTGACTGTGGAAAAGCAAATGGCTTCCAGATTTGCTGGTGTGTGACATCAAAGGGCCTCTTTGGCCTGTTTTTACAATCACAACCTCTGAC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1661250 True 201 lncRNA 0.47 1 42816545 42816745

Neighbor


gene id symbol gene type direction distance location
LOC110493915 LOC106565264 coding upstream 40250 42770305 ~ 42776295 (+)
LOC110493912 LOC106565266 coding upstream 54436 42740378 ~ 42762109 (+)
LOC110493911 LOC106565269 coding upstream 184180 42599720 ~ 42632365 (+)
LOC110493909 arfrp coding upstream 283999 42528749 ~ 42532546 (+)
LOC110493908 LOC106565271 coding upstream 299589 42435328 ~ 42516956 (+)
LOC110493924 LOC106591969 coding downstream 133783 42950528 ~ 42952198 (+)
LOC110493836 LOC106565017 coding downstream 443421 43260166 ~ 43270260 (+)
LOC118940459 NA coding downstream 503052 43319797 ~ 43330019 (+)
LOC118940518 NA coding downstream 506783 43323528 ~ 43323647 (+)
LOC110493832 LOC107715185 coding downstream 513684 43330429 ~ 43330803 (+)
G1451810 NA non-coding upstream 3809 42756284 ~ 42812736 (+)
G1451817 LOC106565263 non-coding upstream 26220 42789636 ~ 42790325 (+)
G1451805 NA non-coding upstream 52319 42753082 ~ 42764226 (+)
G1451784 NA non-coding upstream 86743 42729602 ~ 42729802 (+)
G1451777 NA non-coding upstream 92089 42724219 ~ 42724456 (+)
G1451842 NA non-coding downstream 6127 42822872 ~ 42823113 (+)
G1451851 NA non-coding downstream 14451 42831196 ~ 42831396 (+)
G1451832 NA non-coding downstream 21928 42838673 ~ 42866761 (+)
G1451880 NA non-coding downstream 66935 42883680 ~ 42888834 (+)
G1451971 NA non-coding downstream 172892 42989637 ~ 42989896 (+)
G1450387 NA other upstream 926030 41792883 ~ 41890515 (+)
LOC110493897 LOC106565282 other upstream 1122827 41641874 ~ 41706180 (+)
LOC110493893 cdh22 other upstream 1848479 40767465 ~ 41084819 (+)
G1447998 NA other upstream 3016309 39799936 ~ 39800236 (+)
pmepa1 pmepa1 other upstream 3389645 39342991 ~ 39426900 (+)
G1451948 LOC570405 other downstream 511841 43328586 ~ 43459832 (+)
G1451956 LOC106958509 other downstream 512354 43329099 ~ 43409816 (+)
G1452359 NA other downstream 665515 43482260 ~ 43483693 (+)
G1452362 NA other downstream 674429 43491174 ~ 43492068 (+)
G1452369 NA other downstream 724919 43508719 ~ 43565770 (+)

Expression



Co-expression Network