G1451842


Basic Information

Item Value
gene id G1451842
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 42822872 ~ 42823113 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1661254
ctggaaggatattgacctcatcccgtcagtcgagggtgcctggttgttctttaaaagtaatttcctcaccatcttaaataagcatgcccctttcaaaaaatgtagatctaagaacagatatagcccttggttcactccagacctgactgcccttgaccagcacataaacatcctgtggcgaactgcaatagcatcgaatagtccccacgatatgcaactgttcagggaagtcaggaaccaat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1661254 True 242 lncRNA 0.45 1 42822872 42823113

Neighbor

gene id symbol gene type direction distance location
LOC110493915 LOC106565264 coding upstream 46577 42770305 ~ 42776295 (+)
LOC110493912 LOC106565266 coding upstream 60763 42740378 ~ 42762109 (+)
LOC110493911 LOC106565269 coding upstream 190507 42599720 ~ 42632365 (+)
LOC110493909 arfrp coding upstream 290326 42528749 ~ 42532546 (+)
LOC110493908 LOC106565271 coding upstream 305916 42435328 ~ 42516956 (+)
LOC110493924 LOC106591969 coding downstream 127415 42950528 ~ 42952198 (+)
LOC110493836 LOC106565017 coding downstream 437053 43260166 ~ 43270260 (+)
LOC118940459 NA coding downstream 496684 43319797 ~ 43330019 (+)
LOC118940518 NA coding downstream 500415 43323528 ~ 43323647 (+)
LOC110493832 LOC107715185 coding downstream 507316 43330429 ~ 43330803 (+)
G1451838 NA non-coding upstream 6127 42816545 ~ 42816745 (+)
G1451810 NA non-coding upstream 10136 42756284 ~ 42812736 (+)
G1451817 LOC106565263 non-coding upstream 32547 42789636 ~ 42790325 (+)
G1451805 NA non-coding upstream 58646 42753082 ~ 42764226 (+)
G1451784 NA non-coding upstream 93070 42729602 ~ 42729802 (+)
G1451851 NA non-coding downstream 8083 42831196 ~ 42831396 (+)
G1451832 NA non-coding downstream 15560 42838673 ~ 42866761 (+)
G1451880 NA non-coding downstream 60567 42883680 ~ 42888834 (+)
G1451971 NA non-coding downstream 166524 42989637 ~ 42989896 (+)
G1452000 NA non-coding downstream 202031 43025144 ~ 43025387 (+)
G1450387 NA other upstream 932357 41792883 ~ 41890515 (+)
LOC110493897 LOC106565282 other upstream 1129154 41641874 ~ 41706180 (+)
LOC110493893 cdh22 other upstream 1854806 40767465 ~ 41084819 (+)
G1447998 NA other upstream 3022636 39799936 ~ 39800236 (+)
pmepa1 pmepa1 other upstream 3395972 39342991 ~ 39426900 (+)
G1451948 LOC570405 other downstream 505473 43328586 ~ 43459832 (+)
G1451956 LOC106958509 other downstream 505986 43329099 ~ 43409816 (+)
G1452359 NA other downstream 659147 43482260 ~ 43483693 (+)
G1452362 NA other downstream 668061 43491174 ~ 43492068 (+)
G1452369 NA other downstream 718551 43508719 ~ 43565770 (+)

Expression


Co-expression Network