Gene
RNA
| Item | Value |
|---|---|
| gene id | G1451971 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 42989637 ~ 42989896 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1661398 | True | 260 | lncRNA | 0.35 | 1 | 42989637 | 42989896 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110493924 | LOC106591969 | coding | upstream | 37439 | 42950528 ~ 42952198 (+) |
| LOC110493915 | LOC106565264 | coding | upstream | 213342 | 42770305 ~ 42776295 (+) |
| LOC110493912 | LOC106565266 | coding | upstream | 227528 | 42740378 ~ 42762109 (+) |
| LOC110493911 | LOC106565269 | coding | upstream | 357272 | 42599720 ~ 42632365 (+) |
| LOC110493909 | arfrp | coding | upstream | 457091 | 42528749 ~ 42532546 (+) |
| LOC110493836 | LOC106565017 | coding | downstream | 270270 | 43260166 ~ 43270260 (+) |
| LOC118940459 | NA | coding | downstream | 329901 | 43319797 ~ 43330019 (+) |
| LOC118940518 | NA | coding | downstream | 333632 | 43323528 ~ 43323647 (+) |
| LOC110493832 | LOC107715185 | coding | downstream | 340533 | 43330429 ~ 43330803 (+) |
| LOC118940144 | LOC106024139 | coding | downstream | 342419 | 43332315 ~ 43341386 (+) |
| G1451880 | NA | non-coding | upstream | 100803 | 42883680 ~ 42888834 (+) |
| G1451832 | NA | non-coding | upstream | 122876 | 42838673 ~ 42866761 (+) |
| G1451851 | NA | non-coding | upstream | 158241 | 42831196 ~ 42831396 (+) |
| G1451842 | NA | non-coding | upstream | 166524 | 42822872 ~ 42823113 (+) |
| G1451838 | NA | non-coding | upstream | 172892 | 42816545 ~ 42816745 (+) |
| G1452000 | NA | non-coding | downstream | 35248 | 43025144 ~ 43025387 (+) |
| G1452006 | NA | non-coding | downstream | 49756 | 43039652 ~ 43040023 (+) |
| G1452007 | NA | non-coding | downstream | 52150 | 43042046 ~ 43042283 (+) |
| G1452010 | NA | non-coding | downstream | 57372 | 43047268 ~ 43047948 (+) |
| G1452011 | NA | non-coding | downstream | 59441 | 43049337 ~ 43049667 (+) |
| G1450387 | NA | other | upstream | 1099122 | 41792883 ~ 41890515 (+) |
| LOC110493897 | LOC106565282 | other | upstream | 1295919 | 41641874 ~ 41706180 (+) |
| LOC110493893 | cdh22 | other | upstream | 2021571 | 40767465 ~ 41084819 (+) |
| G1447998 | NA | other | upstream | 3189401 | 39799936 ~ 39800236 (+) |
| pmepa1 | pmepa1 | other | upstream | 3562737 | 39342991 ~ 39426900 (+) |
| G1451948 | LOC570405 | other | downstream | 338690 | 43328586 ~ 43459832 (+) |
| G1451956 | LOC106958509 | other | downstream | 339203 | 43329099 ~ 43409816 (+) |
| G1452359 | NA | other | downstream | 492364 | 43482260 ~ 43483693 (+) |
| G1452362 | NA | other | downstream | 501278 | 43491174 ~ 43492068 (+) |
| G1452369 | NA | other | downstream | 551768 | 43508719 ~ 43565770 (+) |
