G1452006


Basic Information

Item Value
gene id G1452006
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 43039652 ~ 43040023 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1661435
gtgtatggcgtcgtgtggatgagcagtttgctgatgtcaacgttgtgaacagagtgccccatggtggcggtggggatatggtatgagcaggcataagctatggacaacgaattgcattttatcgatggcaatttgaatgcacagagatactgtgagaTCTTGAGaaccattgttgtgccattcatccgcaaccatcaccttatgtttcagcatgataatgcacagccccatgtcccAAGCatctatacacaattcctggcagctgaaaatgtcccgttttttccatggcctgcatactcaccaaacatgtcacccattgagcaacgTTCTCATGTTCAGGCTATCTTCACATTCTTAATAAAGTGTATAAAC

Function

NR:

description
hypothetical protein EH28_04398

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1661435 True 372 lncRNA 0.45 1 43039652 43040023

Neighbor

gene id symbol gene type direction distance location
LOC110493924 LOC106591969 coding upstream 87454 42950528 ~ 42952198 (+)
LOC110493915 LOC106565264 coding upstream 263357 42770305 ~ 42776295 (+)
LOC110493912 LOC106565266 coding upstream 277543 42740378 ~ 42762109 (+)
LOC110493911 LOC106565269 coding upstream 407287 42599720 ~ 42632365 (+)
LOC110493909 arfrp coding upstream 507106 42528749 ~ 42532546 (+)
LOC110493836 LOC106565017 coding downstream 220143 43260166 ~ 43270260 (+)
LOC118940459 NA coding downstream 279774 43319797 ~ 43330019 (+)
LOC118940518 NA coding downstream 283505 43323528 ~ 43323647 (+)
LOC110493832 LOC107715185 coding downstream 290406 43330429 ~ 43330803 (+)
LOC118940144 LOC106024139 coding downstream 292292 43332315 ~ 43341386 (+)
G1452000 NA non-coding upstream 14265 43025144 ~ 43025387 (+)
G1451971 NA non-coding upstream 49756 42989637 ~ 42989896 (+)
G1451880 NA non-coding upstream 150818 42883680 ~ 42888834 (+)
G1451832 NA non-coding upstream 172891 42838673 ~ 42866761 (+)
G1451851 NA non-coding upstream 208256 42831196 ~ 42831396 (+)
G1452007 NA non-coding downstream 2023 43042046 ~ 43042283 (+)
G1452010 NA non-coding downstream 7245 43047268 ~ 43047948 (+)
G1452011 NA non-coding downstream 9314 43049337 ~ 43049667 (+)
G1452013 NA non-coding downstream 12197 43052220 ~ 43052426 (+)
G1452014 NA non-coding downstream 14276 43054299 ~ 43054528 (+)
G1450387 NA other upstream 1149137 41792883 ~ 41890515 (+)
LOC110493897 LOC106565282 other upstream 1345934 41641874 ~ 41706180 (+)
LOC110493893 cdh22 other upstream 2071586 40767465 ~ 41084819 (+)
G1447998 NA other upstream 3239416 39799936 ~ 39800236 (+)
pmepa1 pmepa1 other upstream 3612752 39342991 ~ 39426900 (+)
G1451948 LOC570405 other downstream 288563 43328586 ~ 43459832 (+)
G1451956 LOC106958509 other downstream 289076 43329099 ~ 43409816 (+)
G1452359 NA other downstream 442237 43482260 ~ 43483693 (+)
G1452362 NA other downstream 451151 43491174 ~ 43492068 (+)
G1452369 NA other downstream 501641 43508719 ~ 43565770 (+)

Expression


Co-expression Network