Item | Value |
---|---|
gene id | G1452007 |
gene name | NA |
gene type | non-coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048581.1 |
NCBI id | CM023235.2 |
chromosome length | 95212422 |
location | 43042046 ~ 43042283 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
unnamed protein product, partial |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU1661436 | True | 238 | lncRNA | 0.35 | 1 | 43042046 | 43042283 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110493924 | LOC106591969 | coding | upstream | 89848 | 42950528 ~ 42952198 (+) |
LOC110493915 | LOC106565264 | coding | upstream | 265751 | 42770305 ~ 42776295 (+) |
LOC110493912 | LOC106565266 | coding | upstream | 279937 | 42740378 ~ 42762109 (+) |
LOC110493911 | LOC106565269 | coding | upstream | 409681 | 42599720 ~ 42632365 (+) |
LOC110493909 | arfrp | coding | upstream | 509500 | 42528749 ~ 42532546 (+) |
LOC110493836 | LOC106565017 | coding | downstream | 217883 | 43260166 ~ 43270260 (+) |
LOC118940459 | NA | coding | downstream | 277514 | 43319797 ~ 43330019 (+) |
LOC118940518 | NA | coding | downstream | 281245 | 43323528 ~ 43323647 (+) |
LOC110493832 | LOC107715185 | coding | downstream | 288146 | 43330429 ~ 43330803 (+) |
LOC118940144 | LOC106024139 | coding | downstream | 290032 | 43332315 ~ 43341386 (+) |
G1452006 | NA | non-coding | upstream | 2023 | 43039652 ~ 43040023 (+) |
G1452000 | NA | non-coding | upstream | 16659 | 43025144 ~ 43025387 (+) |
G1451971 | NA | non-coding | upstream | 52150 | 42989637 ~ 42989896 (+) |
G1451880 | NA | non-coding | upstream | 153212 | 42883680 ~ 42888834 (+) |
G1451832 | NA | non-coding | upstream | 175285 | 42838673 ~ 42866761 (+) |
G1452010 | NA | non-coding | downstream | 4985 | 43047268 ~ 43047948 (+) |
G1452011 | NA | non-coding | downstream | 7054 | 43049337 ~ 43049667 (+) |
G1452013 | NA | non-coding | downstream | 9937 | 43052220 ~ 43052426 (+) |
G1452014 | NA | non-coding | downstream | 12016 | 43054299 ~ 43054528 (+) |
G1452015 | NA | non-coding | downstream | 13255 | 43055538 ~ 43055803 (+) |
G1450387 | NA | other | upstream | 1151531 | 41792883 ~ 41890515 (+) |
LOC110493897 | LOC106565282 | other | upstream | 1348328 | 41641874 ~ 41706180 (+) |
LOC110493893 | cdh22 | other | upstream | 2073980 | 40767465 ~ 41084819 (+) |
G1447998 | NA | other | upstream | 3241810 | 39799936 ~ 39800236 (+) |
pmepa1 | pmepa1 | other | upstream | 3615146 | 39342991 ~ 39426900 (+) |
G1451948 | LOC570405 | other | downstream | 286303 | 43328586 ~ 43459832 (+) |
G1451956 | LOC106958509 | other | downstream | 286816 | 43329099 ~ 43409816 (+) |
G1452359 | NA | other | downstream | 439977 | 43482260 ~ 43483693 (+) |
G1452362 | NA | other | downstream | 448891 | 43491174 ~ 43492068 (+) |
G1452369 | NA | other | downstream | 499381 | 43508719 ~ 43565770 (+) |