G1452015


Basic Information

Item Value
gene id G1452015
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 43055538 ~ 43055803 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1661444
ctcctctgccctccactcattacctgtattaatggcacctgtttgaacttgttatcagtataaaagacacctgtccacagcctcaaacagtcacactccaaactccactatggccaagaccaaagagctgtcaaaggacaccagaaacaaaattgtagacctgcaccaggctgggaagactgaatctgcaataggtaagcagcttggtttgaagaaatcaactgtgggagcaattattaggaaatggaagacatacaagaccactg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1661444 True 266 lncRNA 0.44 1 43055538 43055803

Neighbor

gene id symbol gene type direction distance location
LOC110493924 LOC106591969 coding upstream 103340 42950528 ~ 42952198 (+)
LOC110493915 LOC106565264 coding upstream 279243 42770305 ~ 42776295 (+)
LOC110493912 LOC106565266 coding upstream 293429 42740378 ~ 42762109 (+)
LOC110493911 LOC106565269 coding upstream 423173 42599720 ~ 42632365 (+)
LOC110493909 arfrp coding upstream 522992 42528749 ~ 42532546 (+)
LOC110493836 LOC106565017 coding downstream 204363 43260166 ~ 43270260 (+)
LOC118940459 NA coding downstream 263994 43319797 ~ 43330019 (+)
LOC118940518 NA coding downstream 267725 43323528 ~ 43323647 (+)
LOC110493832 LOC107715185 coding downstream 274626 43330429 ~ 43330803 (+)
LOC118940144 LOC106024139 coding downstream 276512 43332315 ~ 43341386 (+)
G1452014 NA non-coding upstream 1010 43054299 ~ 43054528 (+)
G1452013 NA non-coding upstream 3112 43052220 ~ 43052426 (+)
G1452011 NA non-coding upstream 5871 43049337 ~ 43049667 (+)
G1452010 NA non-coding upstream 7590 43047268 ~ 43047948 (+)
G1452007 NA non-coding upstream 13255 43042046 ~ 43042283 (+)
G1452019 NA non-coding downstream 4025 43059828 ~ 43060118 (+)
G1452022 NA non-coding downstream 11651 43067454 ~ 43067767 (+)
G1452030 NA non-coding downstream 118798 43174601 ~ 43174844 (+)
G1452032 NA non-coding downstream 147249 43203052 ~ 43203336 (+)
G1452033 NA non-coding downstream 166078 43221881 ~ 43222647 (+)
G1450387 NA other upstream 1165023 41792883 ~ 41890515 (+)
LOC110493897 LOC106565282 other upstream 1361820 41641874 ~ 41706180 (+)
LOC110493893 cdh22 other upstream 2087472 40767465 ~ 41084819 (+)
G1447998 NA other upstream 3255302 39799936 ~ 39800236 (+)
pmepa1 pmepa1 other upstream 3628638 39342991 ~ 39426900 (+)
G1451948 LOC570405 other downstream 272783 43328586 ~ 43459832 (+)
G1451956 LOC106958509 other downstream 273296 43329099 ~ 43409816 (+)
G1452359 NA other downstream 426457 43482260 ~ 43483693 (+)
G1452362 NA other downstream 435371 43491174 ~ 43492068 (+)
G1452369 NA other downstream 485861 43508719 ~ 43565770 (+)

Expression


Co-expression Network