Gene
RNA
| Item | Value |
|---|---|
| gene id | G1452030 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 43174601 ~ 43174844 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1661459 | True | 244 | lncRNA | 0.55 | 1 | 43174601 | 43174844 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110493924 | LOC106591969 | coding | upstream | 222403 | 42950528 ~ 42952198 (+) |
| LOC110493915 | LOC106565264 | coding | upstream | 398306 | 42770305 ~ 42776295 (+) |
| LOC110493912 | LOC106565266 | coding | upstream | 412492 | 42740378 ~ 42762109 (+) |
| LOC110493911 | LOC106565269 | coding | upstream | 542236 | 42599720 ~ 42632365 (+) |
| LOC110493909 | arfrp | coding | upstream | 642055 | 42528749 ~ 42532546 (+) |
| LOC110493836 | LOC106565017 | coding | downstream | 85322 | 43260166 ~ 43270260 (+) |
| LOC118940459 | NA | coding | downstream | 144953 | 43319797 ~ 43330019 (+) |
| LOC118940518 | NA | coding | downstream | 148684 | 43323528 ~ 43323647 (+) |
| LOC110493832 | LOC107715185 | coding | downstream | 155585 | 43330429 ~ 43330803 (+) |
| LOC118940144 | LOC106024139 | coding | downstream | 157471 | 43332315 ~ 43341386 (+) |
| G1452022 | NA | non-coding | upstream | 106834 | 43067454 ~ 43067767 (+) |
| G1452019 | NA | non-coding | upstream | 114483 | 43059828 ~ 43060118 (+) |
| G1452015 | NA | non-coding | upstream | 118798 | 43055538 ~ 43055803 (+) |
| G1452014 | NA | non-coding | upstream | 120073 | 43054299 ~ 43054528 (+) |
| G1452013 | NA | non-coding | upstream | 122175 | 43052220 ~ 43052426 (+) |
| G1452032 | NA | non-coding | downstream | 28208 | 43203052 ~ 43203336 (+) |
| G1452033 | NA | non-coding | downstream | 47037 | 43221881 ~ 43222647 (+) |
| G1452034 | NA | non-coding | downstream | 55029 | 43229873 ~ 43230096 (+) |
| G1452035 | NA | non-coding | downstream | 63466 | 43238310 ~ 43238545 (+) |
| G1452036 | NA | non-coding | downstream | 64326 | 43239170 ~ 43239400 (+) |
| G1450387 | NA | other | upstream | 1284086 | 41792883 ~ 41890515 (+) |
| LOC110493897 | LOC106565282 | other | upstream | 1480883 | 41641874 ~ 41706180 (+) |
| LOC110493893 | cdh22 | other | upstream | 2206535 | 40767465 ~ 41084819 (+) |
| G1447998 | NA | other | upstream | 3374365 | 39799936 ~ 39800236 (+) |
| pmepa1 | pmepa1 | other | upstream | 3747701 | 39342991 ~ 39426900 (+) |
| G1451948 | LOC570405 | other | downstream | 153742 | 43328586 ~ 43459832 (+) |
| G1451956 | LOC106958509 | other | downstream | 154255 | 43329099 ~ 43409816 (+) |
| G1452359 | NA | other | downstream | 307416 | 43482260 ~ 43483693 (+) |
| G1452362 | NA | other | downstream | 316330 | 43491174 ~ 43492068 (+) |
| G1452369 | NA | other | downstream | 366820 | 43508719 ~ 43565770 (+) |
