G1452036


Basic Information

Item Value
gene id G1452036
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 43239170 ~ 43239400 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1661465
acacatacaacgacacagacttacacatggagtaaaacaaacatacagtcaataatacactATAAACAAgtatatatacgatgtgagcaaatgaggtgagataagggaggtaaaggcaaaaaaaggccatggtggcaaagtaaatacaatatagcaagtaaaacactggaatggtagatttgcaatggaagaaatgtgcaaagtagaaatcaaaataatggggtgcaaagg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1661465 True 231 lncRNA 0.35 1 43239170 43239400

Neighbor

gene id symbol gene type direction distance location
LOC110493924 LOC106591969 coding upstream 286972 42950528 ~ 42952198 (+)
LOC110493915 LOC106565264 coding upstream 462875 42770305 ~ 42776295 (+)
LOC110493912 LOC106565266 coding upstream 477061 42740378 ~ 42762109 (+)
LOC110493911 LOC106565269 coding upstream 606805 42599720 ~ 42632365 (+)
LOC110493909 arfrp coding upstream 706624 42528749 ~ 42532546 (+)
LOC110493836 LOC106565017 coding downstream 20766 43260166 ~ 43270260 (+)
LOC118940459 NA coding downstream 80397 43319797 ~ 43330019 (+)
LOC118940518 NA coding downstream 84128 43323528 ~ 43323647 (+)
LOC110493832 LOC107715185 coding downstream 91029 43330429 ~ 43330803 (+)
LOC118940144 LOC106024139 coding downstream 92915 43332315 ~ 43341386 (+)
G1452035 NA non-coding upstream 625 43238310 ~ 43238545 (+)
G1452034 NA non-coding upstream 9074 43229873 ~ 43230096 (+)
G1452033 NA non-coding upstream 16523 43221881 ~ 43222647 (+)
G1452032 NA non-coding upstream 35834 43203052 ~ 43203336 (+)
G1452030 NA non-coding upstream 64326 43174601 ~ 43174844 (+)
G1452038 NA non-coding downstream 1649 43241049 ~ 43241371 (+)
G1452043 NA non-coding downstream 5109 43244509 ~ 43244854 (+)
G1452048 NA non-coding downstream 11276 43250676 ~ 43252674 (+)
G1451958 NA non-coding downstream 31913 43271313 ~ 43272057 (+)
G1451953 NA non-coding downstream 32751 43272151 ~ 43273171 (+)
G1450387 NA other upstream 1348655 41792883 ~ 41890515 (+)
LOC110493897 LOC106565282 other upstream 1545452 41641874 ~ 41706180 (+)
LOC110493893 cdh22 other upstream 2271104 40767465 ~ 41084819 (+)
G1447998 NA other upstream 3438934 39799936 ~ 39800236 (+)
pmepa1 pmepa1 other upstream 3812270 39342991 ~ 39426900 (+)
G1451948 LOC570405 other downstream 89186 43328586 ~ 43459832 (+)
G1451956 LOC106958509 other downstream 89699 43329099 ~ 43409816 (+)
G1452359 NA other downstream 242860 43482260 ~ 43483693 (+)
G1452362 NA other downstream 251774 43491174 ~ 43492068 (+)
G1452369 NA other downstream 302264 43508719 ~ 43565770 (+)

Expression


Co-expression Network