G1451958


Basic Information

Item Value
gene id G1451958
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 43271313 ~ 43272057 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1661385
taaaagagtgGCTGGTGGgtgatagcccggttagccagtGTGGGgacactggttggtcgggccaattgaggtagtatgtacatgaatgtatagttaaagtgcctatgcatatatgataaacagagtagcagcagcgtagaagggggacacacacacacaatgtaaatagtccgggtagccatttggttacctgttcaggagtcttatggcttgggggtaaaaactgttgaagcCTTTTtctcctagacttggcactccggtatcacttgccatgcggtagtagagagaacagtctatgactggggtggctgggatcTTTAAATTTTTTTAGGacagcctggtgtagaggtctttgatggcaggcagcttagccccagtgatgtactgggccgtacccactgcccttctcctccgattgctcagtttggccgggccgccagttataggaagagtcttgatggttccaaacttcttccatttaaaaatggtgttcttgaggaccttcaatgctgcagaatatttttttggtacccttcaccagttctgtgacacaatcctatctcggagctctgcggacaattccttcgacctcatggcttggtttttgctctgatgtgCACTGTGTGGGGTGTGTTTTCAAATcctgtccagtcaattgaatttaccacaagtggactctaatcaagttgtaggaacatcttAAGGagaatcaatggaaacaggatgcacctgagctcaatttcaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1661385 True 745 lncRNA 0.47 1 43271313 43272057

Neighbor

gene id symbol gene type direction distance location
LOC110493836 LOC106565017 coding upstream 1053 43260166 ~ 43270260 (+)
LOC110493924 LOC106591969 coding upstream 319115 42950528 ~ 42952198 (+)
LOC110493915 LOC106565264 coding upstream 495018 42770305 ~ 42776295 (+)
LOC110493912 LOC106565266 coding upstream 509204 42740378 ~ 42762109 (+)
LOC110493911 LOC106565269 coding upstream 638948 42599720 ~ 42632365 (+)
LOC118940459 NA coding downstream 47740 43319797 ~ 43330019 (+)
LOC118940518 NA coding downstream 51471 43323528 ~ 43323647 (+)
LOC110493832 LOC107715185 coding downstream 58372 43330429 ~ 43330803 (+)
LOC118940144 LOC106024139 coding downstream 60258 43332315 ~ 43341386 (+)
LOC118940451 NA coding downstream 61373 43333430 ~ 43334041 (+)
G1452048 NA non-coding upstream 18639 43250676 ~ 43252674 (+)
G1452043 NA non-coding upstream 26459 43244509 ~ 43244854 (+)
G1452038 NA non-coding upstream 29942 43241049 ~ 43241371 (+)
G1452036 NA non-coding upstream 31913 43239170 ~ 43239400 (+)
G1452035 NA non-coding upstream 32768 43238310 ~ 43238545 (+)
G1451953 NA non-coding downstream 94 43272151 ~ 43273171 (+)
G1452073 NA non-coding downstream 43877 43315934 ~ 43318830 (+)
G1452087 NA non-coding downstream 48728 43320785 ~ 43321022 (+)
G1452089 NA non-coding downstream 54338 43326395 ~ 43326698 (+)
G1452090 NA non-coding downstream 54661 43326718 ~ 43326932 (+)
G1450387 NA other upstream 1380798 41792883 ~ 41890515 (+)
LOC110493897 LOC106565282 other upstream 1577595 41641874 ~ 41706180 (+)
LOC110493893 cdh22 other upstream 2303247 40767465 ~ 41084819 (+)
G1447998 NA other upstream 3471077 39799936 ~ 39800236 (+)
pmepa1 pmepa1 other upstream 3844413 39342991 ~ 39426900 (+)
G1451948 LOC570405 other downstream 56529 43328586 ~ 43459832 (+)
G1451956 LOC106958509 other downstream 57042 43329099 ~ 43409816 (+)
G1452359 NA other downstream 210203 43482260 ~ 43483693 (+)
G1452362 NA other downstream 219117 43491174 ~ 43492068 (+)
G1452369 NA other downstream 269607 43508719 ~ 43565770 (+)

Expression


Co-expression Network