G1452087


Basic Information

Item Value
gene id G1452087
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 43320785 ~ 43321022 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1661519
gtgataaactgcatccagtttgctgagtagagtattggaagccattttgtagatgacatcgccgaagtcgaggatcggtaggatagtcagttttactaaggtaagtttggcggcgtgagtgaaggaggctttgttgcggaatagaaagccgactctagatttgattttagattggggatgtttgatatgagtctggaaggagagtttacagtctagccagacacctatgtacttatag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1661519 True 238 lncRNA 0.43 1 43320785 43321022

Neighbor

gene id symbol gene type direction distance location
LOC110493836 LOC106565017 coding upstream 50525 43260166 ~ 43270260 (+)
LOC110493924 LOC106591969 coding upstream 368587 42950528 ~ 42952198 (+)
LOC110493915 LOC106565264 coding upstream 544490 42770305 ~ 42776295 (+)
LOC110493912 LOC106565266 coding upstream 558676 42740378 ~ 42762109 (+)
LOC110493911 LOC106565269 coding upstream 688420 42599720 ~ 42632365 (+)
LOC118940518 NA coding downstream 2506 43323528 ~ 43323647 (+)
LOC110493832 LOC107715185 coding downstream 9407 43330429 ~ 43330803 (+)
LOC118940144 LOC106024139 coding downstream 11293 43332315 ~ 43341386 (+)
LOC118940451 NA coding downstream 12408 43333430 ~ 43334041 (+)
LOC118940452 LOC108414267 coding downstream 20374 43341396 ~ 43342673 (+)
G1452073 NA non-coding upstream 1955 43315934 ~ 43318830 (+)
G1451953 NA non-coding upstream 47614 43272151 ~ 43273171 (+)
G1451958 NA non-coding upstream 48728 43271313 ~ 43272057 (+)
G1452048 NA non-coding upstream 68111 43250676 ~ 43252674 (+)
G1452043 NA non-coding upstream 75931 43244509 ~ 43244854 (+)
G1452089 NA non-coding downstream 5373 43326395 ~ 43326698 (+)
G1452090 NA non-coding downstream 5696 43326718 ~ 43326932 (+)
G1452364 NA non-coding downstream 176514 43497536 ~ 43497760 (+)
G1452366 NA non-coding downstream 178872 43499894 ~ 43517376 (+)
G1450387 NA other upstream 1430270 41792883 ~ 41890515 (+)
LOC110493897 LOC106565282 other upstream 1627067 41641874 ~ 41706180 (+)
LOC110493893 cdh22 other upstream 2352719 40767465 ~ 41084819 (+)
G1447998 NA other upstream 3520549 39799936 ~ 39800236 (+)
pmepa1 pmepa1 other upstream 3893885 39342991 ~ 39426900 (+)
G1451948 LOC570405 other downstream 7564 43328586 ~ 43459832 (+)
G1451956 LOC106958509 other downstream 8077 43329099 ~ 43409816 (+)
G1452359 NA other downstream 161238 43482260 ~ 43483693 (+)
G1452362 NA other downstream 170152 43491174 ~ 43492068 (+)
G1452369 NA other downstream 220642 43508719 ~ 43565770 (+)

Expression


Co-expression Network