G1452394


Basic Information

Item Value
gene id G1452394
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 43567401 ~ 43574306 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1661930
ttatgtttgaagcctgaaatgtggcaaaaggtcgcaaagttcaagggggccgaatactttcgcaaggcactgtaactgttcaaactagatgatagggacactgtggacaattttcagcaagttgcagcaaataaactaacagaaataaccacttttccataaacaaggtctaaatcatgtttgattgcactctggaagtacatttttcacagaactgttcaaacaagatgatagggacactgtggacaattttcagcaagtggcagcaattgaactacagaaataaccacttttccataaacaaggtctaaatcatgtttgattgcactctggaagtacatttttcacagaactgttcaaactagatgatagggacactatggacaattttcaataAGTTGCAGCAAATAAACTAACAGAAATAACCAcgtttccataaacaaggtctaaatcatgtttgattgcactctggaagtacatttttcacagaactgttcaaactagatgataggaacactgtggacaattttcagcaagttgcagaattgaactacagaaataaccacttttccataaacaaggtctaaatcatgattggttgcactctgaatacaatgttttaaacataactgttcaaactactgGCAGACGAAAACCAGAGAAGATTTGCCTgatcctaaaccctccatacacctaccgaaacacaggacggaactctaagggcggatgcatgacaaccatagagagggctcgccttctgggtttttgtctgctcaaaccacttgtAGTTTAAACActaaccacttgacagggacacatg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1661930 True 820 lncRNA 0.39 2 43567401 43574306

Neighbor

gene id symbol gene type direction distance location
LOC118940464 LOC107581013 coding upstream 108198 43458743 ~ 43459203 (+)
LOC118940465 zgc:163040 coding upstream 109145 43445921 ~ 43458256 (+)
LOC118940460 LOC108414267 coding upstream 114968 43450554 ~ 43452433 (+)
LOC118940462 LOC103395674 coding upstream 125365 43441506 ~ 43442036 (+)
LOC118940146 LOC106906734 coding upstream 126249 43440766 ~ 43441152 (+)
plxnb1b LOC106565257 coding downstream 365611 43939917 ~ 44074496 (+)
LOC110493929 LOC106565256 coding downstream 507990 43985916 ~ 44097283 (+)
setd5 LOC106565254 coding downstream 524650 44098956 ~ 44148363 (+)
mtmr14 mtmr14 coding downstream 697978 44272284 ~ 44315602 (+)
LOC110493933 LOC106565248 coding downstream 750409 44324715 ~ 44545834 (+)
G1452369 NA non-coding upstream 1631 43508719 ~ 43565770 (+)
G1452366 NA non-coding upstream 50025 43499894 ~ 43517376 (+)
G1452364 NA non-coding upstream 69641 43497536 ~ 43497760 (+)
LOC118940144 LOC106024139 non-coding upstream 226015 43332315 ~ 43341386 (+)
G1452090 NA non-coding upstream 240469 43326718 ~ 43326932 (+)
G1452398 NA non-coding downstream 25354 43599660 ~ 43599912 (+)
G1452401 NA non-coding downstream 60826 43635132 ~ 43635333 (+)
G1452406 NA non-coding downstream 91977 43666283 ~ 43666899 (+)
G1452408 NA non-coding downstream 113989 43688295 ~ 43688514 (+)
G1452411 NA non-coding downstream 152813 43727119 ~ 43727352 (+)
G1452362 NA other upstream 75333 43491174 ~ 43492068 (+)
G1452359 NA other upstream 83708 43482260 ~ 43483693 (+)
G1451948 LOC570405 other upstream 107569 43328586 ~ 43459832 (+)
G1451956 LOC106958509 other upstream 157585 43329099 ~ 43409816 (+)
G1452399 NA other downstream 32007 43606313 ~ 43606781 (+)
G1452804 LOC105896813 other downstream 938763 44513069 ~ 44520477 (+)
G1453605 LOC106565239 other downstream 1261691 44835997 ~ 44854739 (+)
G1453889 NA other downstream 1476423 45050729 ~ 45051005 (+)
G1453914 NA other downstream 1495665 45069971 ~ 45070925 (+)

Expression


Co-expression Network