Gene
RNA
| Item | Value |
|---|---|
| gene id | G1452435 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 43817400 ~ 43817768 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| hypothetical protein cypCar_00048916 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1661972 | True | 342 | lncRNA | 0.49 | 2 | 43817400 | 43817768 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118940464 | LOC107581013 | coding | upstream | 358197 | 43458743 ~ 43459203 (+) |
| LOC118940465 | zgc:163040 | coding | upstream | 359144 | 43445921 ~ 43458256 (+) |
| LOC118940460 | LOC108414267 | coding | upstream | 364967 | 43450554 ~ 43452433 (+) |
| LOC118940462 | LOC103395674 | coding | upstream | 375364 | 43441506 ~ 43442036 (+) |
| LOC118940146 | LOC106906734 | coding | upstream | 376248 | 43440766 ~ 43441152 (+) |
| plxnb1b | LOC106565257 | coding | downstream | 122149 | 43939917 ~ 44074496 (+) |
| LOC110493929 | LOC106565256 | coding | downstream | 264528 | 43985916 ~ 44097283 (+) |
| setd5 | LOC106565254 | coding | downstream | 281188 | 44098956 ~ 44148363 (+) |
| mtmr14 | mtmr14 | coding | downstream | 454516 | 44272284 ~ 44315602 (+) |
| LOC110493933 | LOC106565248 | coding | downstream | 506947 | 44324715 ~ 44545834 (+) |
| G1452428 | NA | non-coding | upstream | 45565 | 43768642 ~ 43771835 (+) |
| G1452429 | NA | non-coding | upstream | 48142 | 43766100 ~ 43769258 (+) |
| G1452423 | NA | non-coding | upstream | 80352 | 43736817 ~ 43737048 (+) |
| G1452411 | NA | non-coding | upstream | 90048 | 43727119 ~ 43727352 (+) |
| G1452408 | NA | non-coding | upstream | 128886 | 43688295 ~ 43688514 (+) |
| G1452472 | NA | non-coding | downstream | 12186 | 43829954 ~ 43830198 (+) |
| G1452516 | NA | non-coding | downstream | 280084 | 44097852 ~ 44098834 (+) |
| G1452573 | NA | non-coding | downstream | 284368 | 44102136 ~ 44102448 (+) |
| G1452399 | NA | other | upstream | 210619 | 43606313 ~ 43606781 (+) |
| G1452369 | NA | other | upstream | 253699 | 43508719 ~ 43565770 (+) |
| G1452362 | NA | other | upstream | 325332 | 43491174 ~ 43492068 (+) |
| G1452359 | NA | other | upstream | 333707 | 43482260 ~ 43483693 (+) |
| G1451956 | LOC106958509 | other | upstream | 407584 | 43329099 ~ 43409816 (+) |
| G1452804 | LOC105896813 | other | downstream | 695301 | 44513069 ~ 44520477 (+) |
| G1453605 | LOC106565239 | other | downstream | 1018229 | 44835997 ~ 44854739 (+) |
| G1453889 | NA | other | downstream | 1232961 | 45050729 ~ 45051005 (+) |
| G1453914 | NA | other | downstream | 1252203 | 45069971 ~ 45070925 (+) |
| G1454049 | NA | other | downstream | 1440707 | 45258475 ~ 45259571 (+) |
