G1452472


Basic Information

Item Value
gene id G1452472
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 43829954 ~ 43830198 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1662018
ctatctacagtgccttgcgaaagtattcggcccccttgaactttgcaaacttttgccacattacagacttcaaacataaagatataaaactgtatttttttgtgaagaatcaacaacagtgggacacaatcatgaagtggaacgacatttattggatatttcaaacttttttaacatatcaaaaactgaaaaattgggcgtgcaaaacagGGCAATAGGTTAGTATTCTATTTATCCACTAGATG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1662018 True 245 lncRNA 0.35 1 43829954 43830198

Neighbor

gene id symbol gene type direction distance location
LOC118940464 LOC107581013 coding upstream 370751 43458743 ~ 43459203 (+)
LOC118940465 zgc:163040 coding upstream 371698 43445921 ~ 43458256 (+)
LOC118940460 LOC108414267 coding upstream 377521 43450554 ~ 43452433 (+)
LOC118940462 LOC103395674 coding upstream 387918 43441506 ~ 43442036 (+)
LOC118940146 LOC106906734 coding upstream 388802 43440766 ~ 43441152 (+)
plxnb1b LOC106565257 coding downstream 109719 43939917 ~ 44074496 (+)
LOC110493929 LOC106565256 coding downstream 252098 43985916 ~ 44097283 (+)
setd5 LOC106565254 coding downstream 268758 44098956 ~ 44148363 (+)
mtmr14 mtmr14 coding downstream 442086 44272284 ~ 44315602 (+)
LOC110493933 LOC106565248 coding downstream 494517 44324715 ~ 44545834 (+)
G1452435 NA non-coding upstream 12186 43817400 ~ 43817768 (+)
G1452428 NA non-coding upstream 58119 43768642 ~ 43771835 (+)
G1452429 NA non-coding upstream 60696 43766100 ~ 43769258 (+)
G1452423 NA non-coding upstream 92906 43736817 ~ 43737048 (+)
G1452411 NA non-coding upstream 102602 43727119 ~ 43727352 (+)
G1452516 NA non-coding downstream 267654 44097852 ~ 44098834 (+)
G1452573 NA non-coding downstream 271938 44102136 ~ 44102448 (+)
G1452574 NA non-coding downstream 272565 44102763 ~ 44102973 (+)
G1452399 NA other upstream 223173 43606313 ~ 43606781 (+)
G1452369 NA other upstream 266253 43508719 ~ 43565770 (+)
G1452362 NA other upstream 337886 43491174 ~ 43492068 (+)
G1452359 NA other upstream 346261 43482260 ~ 43483693 (+)
G1451956 LOC106958509 other upstream 420138 43329099 ~ 43409816 (+)
G1452804 LOC105896813 other downstream 682871 44513069 ~ 44520477 (+)
G1453605 LOC106565239 other downstream 1005799 44835997 ~ 44854739 (+)
G1453889 NA other downstream 1220531 45050729 ~ 45051005 (+)
G1453914 NA other downstream 1239773 45069971 ~ 45070925 (+)
G1454049 NA other downstream 1428277 45258475 ~ 45259571 (+)

Expression


Co-expression Network