G1452511


Basic Information

Item Value
gene id G1452511
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 44148876 ~ 44149942 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1662062
CTGCCATTTTTTTATTAGAAGGAAATTATATACATACAATGAAGTCAACAGTGAAATATTGGCATGCATCTCCTTAGCTTAACAAACTAAGTGACGCTAGGGTGCTTAGCAATATGTCACTGAGGCTTGCGTAAAGTTGCAAATTCAGACATGCACCAAAATCTCGGTGTCGTGTGAAGTCGCGAAGCCTCTGGAGTACGCCTAGTGAAGTGTAAACCCAGCATACGTTTGTGAAGTTGACTGATGGCGCTCTCGCTACCTTTCACATTGAAAACCTAATCAGGGTGCGAAAGCGCCACTTAGTCAATGTCATATAGAAGATTGAACACCTACGAAAGAACAGAGGGGAAAATTATAAAATGGGGAAATGGCTATAGACCTTTTTGTAACACTGCGTGGTAATGACGGGTGTCTGGTTGGGGTATGGGCGCCCACACTTGGGCAGCGGAGTGTAATAGCGTTGACATGTATAATGCAACGCCATTTGTCTTGCGTACCTGTCGCGAGGTGATACATGGGCTGTCCTCTTAGAAGGGCAACGCAGTCCACCAATCAACTCAGTTGGTCCCATGTACCAGTGGTCATTACAGTAAGGCGACAGGCAGGAATCTGAACAAGCATATTGGGACGATGGGAAACTGTACACGAGTTGGTTGCTACTTTTGCGGTACTTGTTTGACAACACCTTATTAGTATCCATGCCAACTGAGGAGATCCTTTGGTCCAGTTAAATGTTTTTACAGTCAATATTGTTGCACACACTGGCACCCAACTCACAGGATGGGAGTTGGGTTGTTCAATTCGGGAATTTGTTCCTCCTTTTGAGAGAACCAATTCCCAAATTGAAGGTCGAGTGGGGTTGTCTGCAGCGTAACTGCTTCATTAAAGGGTCCACTGCCAGAGTCTTGCCGTCTTGTATTTTGAGTGTTGGGGGCATCGGTGTCTTCCTTCACCGGATCCAGCTGTAGGCACGACACTCCACCTCCGGCAATTCCTTATAAACGATGCGGTAGCCACACTCTGTCGAAACCCGCTGGCACTTGTTGGGCCATGTGGTAGGTTTCATC

Function

NR:

description
PREDICTED: uncharacterized protein LOC106565255

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1662062 True 1067 lncRNA 0.47 1 44148876 44149942

Neighbor

gene id symbol gene type direction distance location
setd5 LOC106565254 coding upstream 513 44098956 ~ 44148363 (+)
LOC110493929 LOC106565256 coding upstream 51593 43985916 ~ 44097283 (+)
plxnb1b LOC106565257 coding upstream 74380 43939917 ~ 44074496 (+)
LOC118940464 LOC107581013 coding upstream 689673 43458743 ~ 43459203 (+)
LOC118940465 zgc:163040 coding upstream 690620 43445921 ~ 43458256 (+)
mtmr14 mtmr14 coding downstream 122342 44272284 ~ 44315602 (+)
LOC110493933 LOC106565248 coding downstream 174773 44324715 ~ 44545834 (+)
si:dkey-156n14.3 LOC106565245 coding downstream 402971 44552913 ~ 44571070 (+)
LOC110493936 LOC106565244 coding downstream 451961 44601903 ~ 44615849 (+)
LOC110493938 LOC106565241 coding downstream 619534 44769476 ~ 44797689 (+)
G1452583 NA non-coding upstream 31571 44117065 ~ 44117305 (+)
G1452575 NA non-coding upstream 45578 44103017 ~ 44103298 (+)
G1452574 NA non-coding upstream 45903 44102763 ~ 44102973 (+)
G1452573 NA non-coding upstream 46428 44102136 ~ 44102448 (+)
G1452516 NA non-coding upstream 50042 44097852 ~ 44098834 (+)
G1452515 NA non-coding downstream 732 44150674 ~ 44151034 (+)
G1452589 NA non-coding downstream 3535 44153477 ~ 44153848 (+)
G1452596 NA non-coding downstream 9227 44159169 ~ 44159387 (+)
G1452597 NA non-coding downstream 9978 44159920 ~ 44160159 (+)
G1452598 NA non-coding downstream 11785 44161727 ~ 44220034 (+)
G1452399 NA other upstream 542095 43606313 ~ 43606781 (+)
G1452369 NA other upstream 585175 43508719 ~ 43565770 (+)
G1452362 NA other upstream 656808 43491174 ~ 43492068 (+)
G1452359 NA other upstream 665183 43482260 ~ 43483693 (+)
G1451956 LOC106958509 other upstream 739060 43329099 ~ 43409816 (+)
G1452804 LOC105896813 other downstream 363127 44513069 ~ 44520477 (+)
G1453605 LOC106565239 other downstream 686055 44835997 ~ 44854739 (+)
G1453889 NA other downstream 900787 45050729 ~ 45051005 (+)
G1453914 NA other downstream 920029 45069971 ~ 45070925 (+)
G1454049 NA other downstream 1108533 45258475 ~ 45259571 (+)

Expression


Co-expression Network