G1452674


Basic Information

Item Value
gene id G1452674
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 44286589 ~ 44286861 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1662227
gtccttgtcccattgcgctcgagtgactccttgtggtgtgCCAGGCGCCTGCAAGCTAGCTTCGGTtaccagttgtacggtgtttccttcgTCACATTGGTGTGTCTGGCTTTAGGggtaagcgagcagtgtgtcaagaagcagtgcgcttggcagggtcgtgtttcggaggacgcgtggttctcgaccttcgcctctcccgagtccgtacgggagttgcagcagcGAGACTAGGCTGTAACTACCAATCAcaaaattgaggagaaaaaaggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1662227 True 273 lncRNA 0.55 1 44286589 44286861

Neighbor

gene id symbol gene type direction distance location
setd5 LOC106565254 coding upstream 138226 44098956 ~ 44148363 (+)
LOC110493929 LOC106565256 coding upstream 189306 43985916 ~ 44097283 (+)
plxnb1b LOC106565257 coding upstream 212093 43939917 ~ 44074496 (+)
LOC118940464 LOC107581013 coding upstream 827386 43458743 ~ 43459203 (+)
LOC118940460 LOC108414267 coding upstream 834156 43450554 ~ 43452433 (+)
LOC110493933 LOC106565248 coding downstream 37854 44324715 ~ 44545834 (+)
si:dkey-156n14.3 LOC106565245 coding downstream 266052 44552913 ~ 44571070 (+)
LOC110493936 LOC106565244 coding downstream 315042 44601903 ~ 44615849 (+)
LOC110493938 LOC106565241 coding downstream 482615 44769476 ~ 44797689 (+)
LOC118940467 NA coding downstream 560256 44847117 ~ 44858271 (+)
G1452667 NA non-coding upstream 17060 44269239 ~ 44269529 (+)
G1452598 NA non-coding upstream 66555 44161727 ~ 44220034 (+)
G1452597 NA non-coding upstream 126430 44159920 ~ 44160159 (+)
G1452596 NA non-coding upstream 127202 44159169 ~ 44159387 (+)
G1452589 NA non-coding upstream 132741 44153477 ~ 44153848 (+)
G1452675 NA non-coding downstream 8059 44294920 ~ 44295127 (+)
G1452679 NA non-coding downstream 21360 44308221 ~ 44308447 (+)
mtmr14 mtmr14 non-coding downstream 26520 44272284 ~ 44315602 (+)
G1452690 NA non-coding downstream 49387 44336248 ~ 44342620 (+)
G1452762 NA non-coding downstream 174310 44461171 ~ 44465402 (+)
G1452399 NA other upstream 679808 43606313 ~ 43606781 (+)
G1452369 NA other upstream 722888 43508719 ~ 43565770 (+)
G1452362 NA other upstream 794521 43491174 ~ 43492068 (+)
G1452359 NA other upstream 802896 43482260 ~ 43483693 (+)
G1451956 LOC106958509 other upstream 876773 43329099 ~ 43409816 (+)
G1452804 LOC105896813 other downstream 226208 44513069 ~ 44520477 (+)
G1453605 LOC106565239 other downstream 549136 44835997 ~ 44854739 (+)
G1453889 NA other downstream 763868 45050729 ~ 45051005 (+)
G1453914 NA other downstream 783110 45069971 ~ 45070925 (+)
G1454049 NA other downstream 971614 45258475 ~ 45259571 (+)

Expression


Co-expression Network