G1452804 (LOC105896813)


Basic Information

Item Value
gene id G1452804
gene name LOC105896813
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 44513069 ~ 44520477 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1662359
gctgaatgacataacagtgaagaatcgttatccgcttcctcttatgtcttcagccttcgagatcctgcagggagccaggtttttcactaagttggaccttcgtaacgcttaccatctcgtgcgcatcagggagggggacgagtggaagacggcgtttaacactccgttagggcactttgaatactgggttcttcctttcggcctcgctaacgctccagctgtctttcaggcattagtcaatgatgtcctgagagacatgctgaacatctttgttttcgtttaccttgacgatatcctgatttttt

Function

NR:

description
PREDICTED: uncharacterized protein LOC109045530

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1662359 True 305 TUCP 0.48 2 44513069 44520477

Neighbor

gene id symbol gene type direction distance location
mtmr14 mtmr14 coding upstream 197467 44272284 ~ 44315602 (+)
setd5 LOC106565254 coding upstream 364706 44098956 ~ 44148363 (+)
LOC110493929 LOC106565256 coding upstream 415786 43985916 ~ 44097283 (+)
plxnb1b LOC106565257 coding upstream 438573 43939917 ~ 44074496 (+)
LOC118940464 LOC107581013 coding upstream 1053866 43458743 ~ 43459203 (+)
si:dkey-156n14.3 LOC106565245 coding downstream 32436 44552913 ~ 44571070 (+)
LOC110493936 LOC106565244 coding downstream 81426 44601903 ~ 44615849 (+)
LOC110493938 LOC106565241 coding downstream 248999 44769476 ~ 44797689 (+)
LOC118940467 NA coding downstream 326640 44847117 ~ 44858271 (+)
LOC110493942 bin2 coding downstream 375486 44895963 ~ 44930156 (+)
G1452784 NA non-coding upstream 23310 44489549 ~ 44489759 (+)
G1452780 NA non-coding upstream 26513 44486317 ~ 44486556 (+)
G1452762 NA non-coding upstream 47667 44461171 ~ 44465402 (+)
G1452690 NA non-coding upstream 170449 44336248 ~ 44342620 (+)
G1452821 NA non-coding downstream 50772 44571249 ~ 44571912 (+)
G1452827 NA non-coding downstream 52284 44572761 ~ 44573379 (+)
G1453368 NA non-coding downstream 88198 44608675 ~ 44608890 (+)
G1453370 NA non-coding downstream 89742 44610219 ~ 44610431 (+)
G1452399 NA other upstream 906288 43606313 ~ 43606781 (+)
G1452369 NA other upstream 949368 43508719 ~ 43565770 (+)
G1452362 NA other upstream 1021001 43491174 ~ 43492068 (+)
G1452359 NA other upstream 1029376 43482260 ~ 43483693 (+)
G1451948 LOC570405 other upstream 1053237 43328586 ~ 43459832 (+)
G1453605 LOC106565239 other downstream 315520 44835997 ~ 44854739 (+)
G1453889 NA other downstream 530252 45050729 ~ 45051005 (+)
G1453914 NA other downstream 549494 45069971 ~ 45070925 (+)
G1454049 NA other downstream 737998 45258475 ~ 45259571 (+)
G1454127 NA other downstream 814817 45335294 ~ 45336523 (+)

Expression


Co-expression Network