G1453418


Basic Information

Item Value
gene id G1453418
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 44645234 ~ 44645461 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1663046
TCCTCCACCAGCACCCAGCACTTCTTCTCCGGaacgtacccctcccactccacgaggtactcgAGTCCAGGATAGCTCGAACCACAtatgccggggccccctcgatgtccagagggggcggaggaacctcccacaCCTCCgactcctggagtggaccagcccCCACAGGTCTGAGGAGaaacacatggaacgagggattAATACGGTAATCTGGGGGAAGCTGTAATC

Function

NR:

description
PREDICTED: transposon Tf2-1 polyprotein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1663046 True 228 lncRNA 0.60 1 44645234 44645461

Neighbor

gene id symbol gene type direction distance location
LOC110493936 LOC106565244 coding upstream 29385 44601903 ~ 44615849 (+)
si:dkey-156n14.3 LOC106565245 coding upstream 74164 44552913 ~ 44571070 (+)
LOC110493933 LOC106565248 coding upstream 99400 44324715 ~ 44545834 (+)
mtmr14 mtmr14 coding upstream 329632 44272284 ~ 44315602 (+)
setd5 LOC106565254 coding upstream 496871 44098956 ~ 44148363 (+)
LOC110493938 LOC106565241 coding downstream 124015 44769476 ~ 44797689 (+)
LOC118940467 NA coding downstream 201656 44847117 ~ 44858271 (+)
LOC110493942 bin2 coding downstream 250502 44895963 ~ 44930156 (+)
LOC110493946 LOC106565237 coding downstream 324017 44969478 ~ 45029092 (+)
LOC110493947 LOC106565236 coding downstream 418221 45063682 ~ 45069411 (+)
G1453390 NA non-coding upstream 14391 44626259 ~ 44630843 (+)
G1453374 NA non-coding upstream 32729 44612259 ~ 44612505 (+)
G1453373 NA non-coding upstream 33013 44611935 ~ 44612221 (+)
G1453372 NA non-coding upstream 33406 44611625 ~ 44611828 (+)
G1453529 NA non-coding downstream 68678 44714139 ~ 44714385 (+)
G1453534 NA non-coding downstream 72084 44717545 ~ 44717836 (+)
G1453535 NA non-coding downstream 72432 44717893 ~ 44718805 (+)
G1453541 NA non-coding downstream 76254 44721715 ~ 44721940 (+)
G1453544 NA non-coding downstream 79655 44725116 ~ 44725359 (+)
G1452804 LOC105896813 other upstream 124757 44513069 ~ 44520477 (+)
G1452399 NA other upstream 1038453 43606313 ~ 43606781 (+)
G1452369 NA other upstream 1081533 43508719 ~ 43565770 (+)
G1452362 NA other upstream 1153166 43491174 ~ 43492068 (+)
G1452359 NA other upstream 1161541 43482260 ~ 43483693 (+)
G1453605 LOC106565239 other downstream 190536 44835997 ~ 44854739 (+)
G1453889 NA other downstream 405268 45050729 ~ 45051005 (+)
G1453914 NA other downstream 424510 45069971 ~ 45070925 (+)
G1454049 NA other downstream 613014 45258475 ~ 45259571 (+)
G1454127 NA other downstream 689833 45335294 ~ 45336523 (+)

Expression


Co-expression Network