G1453535


Basic Information

Item Value
gene id G1453535
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 44717893 ~ 44718805 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1663164
ggatatagcggtcacgacaacgcagaaaaaaaatccaaattatatccatactGTCAacaaaaacatggcaaacgttttttataatcaatcctcaaggtgtttttcaaatatctattcgataatatatcaaccgggacagttggcttttcactaggaccgggaggaacaatggccgcctctctcttttgcgcaaaaatcactctgagagcccccacctgacCACTTACGTAATGTGGTCATTCaagctcattcttcaaaataaaggcctgaaactgtgtctaaaggctgtagacacattagggaagccatagaaaaaggaatctggttgatatccctttccatggtcaatagggatgcataggaacacagagctttcaaaataagagttacttcctgattggatttttctcaggctttcgcctgcaatatcagttctgttatactcacagacaatatttgtacagtttttggaaactttagagtgttttctatcctaaactgtcaattatatgcacattctagcatctggtcctgagaaataggctgtttactttgggaacgttatttttccaaaaataaaaatagtgccccctagcttcaagaggttaattaacagtcaactgagtgtatgtaaacatctgacccactggaattgtgatacagtgaattctaagtgaaataatctgtctataaacaattgttggaaaaatatattgtgtcatacacaaagtagatggtcctaaccaacttgccaaaactatagtttgttaacaagaaatttttggagtggttgaaaaacgagttttaattactccaacctaagtgtatgtaaacttcaactgtagatgtaggatcttaagccagtttgctacagcaggaaaataatcctgcagcaacaagaaatgaattatta

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1663164 True 913 lncRNA 0.37 1 44717893 44718805

Neighbor

gene id symbol gene type direction distance location
LOC110493936 LOC106565244 coding upstream 102044 44601903 ~ 44615849 (+)
si:dkey-156n14.3 LOC106565245 coding upstream 146823 44552913 ~ 44571070 (+)
LOC110493933 LOC106565248 coding upstream 172059 44324715 ~ 44545834 (+)
mtmr14 mtmr14 coding upstream 402291 44272284 ~ 44315602 (+)
setd5 LOC106565254 coding upstream 569530 44098956 ~ 44148363 (+)
LOC110493938 LOC106565241 coding downstream 50671 44769476 ~ 44797689 (+)
LOC118940467 NA coding downstream 128312 44847117 ~ 44858271 (+)
LOC110493942 bin2 coding downstream 177158 44895963 ~ 44930156 (+)
LOC110493946 LOC106565237 coding downstream 250673 44969478 ~ 45029092 (+)
LOC110493947 LOC106565236 coding downstream 344877 45063682 ~ 45069411 (+)
G1453534 NA non-coding upstream 57 44717545 ~ 44717836 (+)
G1453529 NA non-coding upstream 3508 44714139 ~ 44714385 (+)
G1453418 NA non-coding upstream 72432 44645234 ~ 44645461 (+)
G1453390 NA non-coding upstream 87050 44626259 ~ 44630843 (+)
G1453541 NA non-coding downstream 2910 44721715 ~ 44721940 (+)
G1453544 NA non-coding downstream 6311 44725116 ~ 44725359 (+)
G1453563 NA non-coding downstream 20503 44739308 ~ 44739623 (+)
G1453568 NA non-coding downstream 26704 44745509 ~ 44745738 (+)
G1453573 NA non-coding downstream 29299 44748104 ~ 44752126 (+)
G1452804 LOC105896813 other upstream 197416 44513069 ~ 44520477 (+)
G1452399 NA other upstream 1111112 43606313 ~ 43606781 (+)
G1452369 NA other upstream 1154192 43508719 ~ 43565770 (+)
G1452362 NA other upstream 1225825 43491174 ~ 43492068 (+)
G1452359 NA other upstream 1234200 43482260 ~ 43483693 (+)
G1453605 LOC106565239 other downstream 117192 44835997 ~ 44854739 (+)
G1453889 NA other downstream 331924 45050729 ~ 45051005 (+)
G1453914 NA other downstream 351166 45069971 ~ 45070925 (+)
G1454049 NA other downstream 539670 45258475 ~ 45259571 (+)
G1454127 NA other downstream 616489 45335294 ~ 45336523 (+)

Expression


Co-expression Network