G1453605 (LOC106565239)


Basic Information

Item Value
gene id G1453605
gene name LOC106565239
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 44835997 ~ 44854739 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1663269
AGGTGGGGTGGATGCCGATGGTGTTGTCCAGCTGCTCTTTAGTCAGTCCGCACTTCATGGCCGCGCCATAGCCCTGCGTCACCTCGCCAGCGTTGGGCCCCAGGTAGTGGAACCCGATCACACGGTCATTGTCCAGTTTATTGCAGATGATCTTGGAGTAGCACTTGTTGTTGTCCCTGTTGGGGACAGTGAACTCCAGAGGCCAGAAGAGACTGTGGTACACCTCCAAGTTGTCTTGGCCGTACAGCTCAATAGCTTTCTCCTCAGAATGCCCACAGGCGCCATACTCCAGAGGGGTGAACACAGTGGTGGGAACGTTTACGTAGTCACACTTGAGGGAGGCTCCCGCGTACAGCCGGCGTGCCAGCAGCTTTCCGGCCTGGATGGCCACGGGTGTCAGCTCCCACTTGCCCTCCAGGATGTCTCCGATGGCGTAGATGTGCGGCACGTTGGTCTGTTCCTCGTCGTTCACCGGAACCTTACCGTTCTGGGGTTGACTTTGACTCCGGCTTGATCCAGGCCGATCTTGCCTGTACACGCGTCACGCCCCACGGCTATCAACACAGTGTTGTATTCTCCCTCGATGGTCTCGTCACTCTCCGTGCTCTTGGCTGTCACCTTCAGCCTCCCAGGAGTGCctgcctccagctcctccacCTTGACTGGGACGTACTTCCGGAGGAACTTGACACCATGCTCTTCCATGTGTTCCCCGGCGCGGTTGGCCATGTCCTGGTCGAAGCCCCTCAGCAAGATGGAGCGTACCATGACCGTCACGTCCAGGCCCAGGCCCGCAAGGAAACCCCCGCACTCCAGTGCCACGTAGGATGCCCCGATCACCAGGGTCTTGCCGGGGCAGTGGGGGAGCGAGAACAGGTCATCGCTGGTGATGCAGTACTCTTTGTCTCCGGGGATGCCCAGGTAACGCGGTCTCTCGCCCGTCGCCAGGATAAACTTAGCTGCTGTGTGGAAGGTCTCCTTTCCTCGCTTGTTGGTCGCCTTGATTTTGTGTGGCTCGATGAACTCTGCGTAGGAATTGACGTAGTTGACGTTTTTGTCGCGCAGTGCCACCCGGTAGCCCCAGTTCAACGACCCAATGTAGTTGTTCACTGCCGTCTTCATCGTCTCCCAGTTGTGTTTCACTGTCTCCTCAGGCACCTCCCAGCCAAACTTGCGGGCGTCCTGTATGGACGTCCCGAGCAGGGCTGTCTGGTGCATCAGCTTCTTGGGGATGCAGCCCACGTTCACGCACGTGCCACCCAGGCCTGTTCAGGGACACGTACAGAATCACACATTTGGAGATTTCATTTAGATCCCATTGAAACATGCAGACATGTTGCAACTGAAAACAGCGGTATTCTGCTAGCTATTTTGATTTATGCGTCG

Function

NR:

description
thioredoxin reductase 3a

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1663269 True 1386 TUCP 0.57 10 44835997 44854739

Neighbor

gene id symbol gene type direction distance location
LOC110493938 LOC106565241 coding upstream 41057 44769476 ~ 44797689 (+)
LOC110493936 LOC106565244 coding upstream 220148 44601903 ~ 44615849 (+)
si:dkey-156n14.3 LOC106565245 coding upstream 264927 44552913 ~ 44571070 (+)
LOC110493933 LOC106565248 coding upstream 290163 44324715 ~ 44545834 (+)
mtmr14 mtmr14 coding upstream 520395 44272284 ~ 44315602 (+)
LOC110493942 bin2 coding downstream 41224 44895963 ~ 44930156 (+)
LOC110493946 LOC106565237 coding downstream 114739 44969478 ~ 45029092 (+)
LOC110493947 LOC106565236 coding downstream 208943 45063682 ~ 45069411 (+)
LOC110493949 LOC106565235 coding downstream 224867 45079606 ~ 45087749 (+)
trnaq-uug-4 NA coding downstream 498739 45353478 ~ 45353549 (+)
G1453612 NA non-coding upstream 16006 44819707 ~ 44819991 (+)
G1453573 NA non-coding upstream 83871 44748104 ~ 44752126 (+)
G1453568 NA non-coding upstream 90259 44745509 ~ 44745738 (+)
G1453563 NA non-coding upstream 96374 44739308 ~ 44739623 (+)
G1453637 NA non-coding downstream 33652 44888391 ~ 44888641 (+)
G1453661 NA non-coding downstream 93748 44948487 ~ 44948877 (+)
G1453666 NA non-coding downstream 174628 45029367 ~ 45029564 (+)
G1453667 NA non-coding downstream 176478 45031217 ~ 45031471 (+)
G1453879 NA non-coding downstream 187694 45042433 ~ 45042916 (+)
G1452804 LOC105896813 other upstream 315520 44513069 ~ 44520477 (+)
G1452399 NA other upstream 1229216 43606313 ~ 43606781 (+)
G1452369 NA other upstream 1272296 43508719 ~ 43565770 (+)
G1452362 NA other upstream 1343929 43491174 ~ 43492068 (+)
G1452359 NA other upstream 1352304 43482260 ~ 43483693 (+)
G1453889 NA other downstream 195990 45050729 ~ 45051005 (+)
G1453914 NA other downstream 215232 45069971 ~ 45070925 (+)
G1454049 NA other downstream 403736 45258475 ~ 45259571 (+)
G1454127 NA other downstream 480555 45335294 ~ 45336523 (+)
G1454824 NA other downstream 1001510 45856249 ~ 45858501 (+)

Expression


Co-expression Network