G1453879


Basic Information

Item Value
gene id G1453879
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 45042433 ~ 45042916 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1663567
ACCCAAACCGTCTGCGAGTGTGCGCCATCGTGCGTCATTATGCGTAAAtctattttgtccccctacaccaaacgcgatcacgacacgcaggttaaaatatcaaaacaaactctgaaccaattacattaatttggggacaggtcgaaaagcattaaacatttatggcaatttagctagttagcttgcacttgctagctaatttgtcctacttagctagcttgctattgctagataatttgtcctgggatataaacattgagttgttattttacctgaaatgcacaaggtcctctactccgacaattaatccacacataaaacagtcaaccgaatcgtttctggtcatctctcctccttccaggctttttcatctttgaacttatatggtgattggcatctaaactttcatcgAATTACCACAACGAGAGGCAacacagttcatctttcaatcacccacatgggtataaccaatgaggagatggca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1663567 True 484 lncRNA 0.41 1 45042433 45042916

Neighbor

gene id symbol gene type direction distance location
LOC110493946 LOC106565237 coding upstream 13341 44969478 ~ 45029092 (+)
LOC110493942 bin2 coding upstream 112277 44895963 ~ 44930156 (+)
LOC118940467 NA coding upstream 184162 44847117 ~ 44858271 (+)
LOC110493938 LOC106565241 coding upstream 247493 44769476 ~ 44797689 (+)
LOC110493936 LOC106565244 coding upstream 426584 44601903 ~ 44615849 (+)
LOC110493947 LOC106565236 coding downstream 20766 45063682 ~ 45069411 (+)
LOC110493949 LOC106565235 coding downstream 36690 45079606 ~ 45087749 (+)
trnaq-uug-4 NA coding downstream 310562 45353478 ~ 45353549 (+)
LOC110493956 LOC106565228 coding downstream 475810 45518726 ~ 45526398 (+)
e3 e3 coding downstream 524338 45567254 ~ 45572753 (+)
G1453667 NA non-coding upstream 10962 45031217 ~ 45031471 (+)
G1453666 NA non-coding upstream 12869 45029367 ~ 45029564 (+)
G1453661 NA non-coding upstream 93556 44948487 ~ 44948877 (+)
G1453637 NA non-coding upstream 153792 44888391 ~ 44888641 (+)
G1453612 NA non-coding upstream 222442 44819707 ~ 44819991 (+)
G1453885 NA non-coding downstream 3080 45045996 ~ 45049214 (+)
G1453913 NA non-coding downstream 44840 45087756 ~ 45091335 (+)
G1453915 NA non-coding downstream 50179 45093095 ~ 45094284 (+)
G1453990 NA non-coding downstream 129874 45172790 ~ 45172996 (+)
G1454023 NA non-coding downstream 169621 45212537 ~ 45212737 (+)
G1453605 LOC106565239 other upstream 187694 44835997 ~ 44854739 (+)
G1452804 LOC105896813 other upstream 521956 44513069 ~ 44520477 (+)
G1452399 NA other upstream 1435652 43606313 ~ 43606781 (+)
G1452369 NA other upstream 1478732 43508719 ~ 43565770 (+)
G1452362 NA other upstream 1550365 43491174 ~ 43492068 (+)
G1453889 NA other downstream 7813 45050729 ~ 45051005 (+)
G1453914 NA other downstream 27055 45069971 ~ 45070925 (+)
G1454049 NA other downstream 215559 45258475 ~ 45259571 (+)
G1454127 NA other downstream 292378 45335294 ~ 45336523 (+)
G1454824 NA other downstream 813333 45856249 ~ 45858501 (+)

Expression


Co-expression Network