G1453915


Basic Information

Item Value
gene id G1453915
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 45093095 ~ 45094284 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1663605
ACTTTGGAGACTGGAAGGGAAAAGGGGCATATGCTTTGCACAGGTATCCGTGCACGTGAATCATAGGGTTCGTTATGTGATGATAAAAAATATGACCATTATCTATTGACATTTGCCATACAATATGCAATCGATAAAACTTACAATAATTCAATCAGCTTAAAAAACACAAGTATGATCATTCATATGTTTTTATCACCAATCCCAGGAGAGCTTCAATGGGGTCTATACTGTCATTCTCTCCTTGGTTCACATGACAAAATGCACAGTGCAAAAAAAGTCTGAACAAAATTCTCAGTCTCTTTTTCTTCATTTTGTTGGCGACGCATAAATACGAATGACATCATCGGAACGAGATGCGTTTTAGGTGTCCCCTGGTGAGTGTCCAATGTCTGTTTTCCTTCATAGGGACTTCCTGTGGGGACGTGGGACAACTTCCTACTTCCTTTTGTAATTCGGCCTGGCGATGCTCCGCGGTAACCTGTGACCAAGGCAACAAAAAGTTGTCCTCTTCCCCAGAGAGACTCTGTTTACAGCCAGCTGTCTAGCTGGTCTTTGTCAAGTCACTTCATGATACAAGTCAAGTCGTAACCTCCCCAGTGGTGTTTGAAAGCGGTTTGGAGTAagggtgtatatatataaatatacacccTTCCAGTTTCTGCTCAGGTCTGGTGCTCCTCTCCTTCTGTGTCCTCACAATTCGCAATGTTACATGGTAATGGAGGAGTAACACACCCGGAAAGGCACGAAGTGGCATGCCAAGAACACAAGTGTTCCTTGTCCTTCCTCTTGGTCCTCCTTCACCCTGTTAATGGGATGTCTTCTCAGTGTGTGGTTAAGTTGCGGTCGAAGCAGGCGAGTGGTCTTAGTAAGGCCAGTAGTACTGTGTTCCGATGAGGTGTAGGAGTGTGTGAGGTGTACACTAGTCACTTTGACTATTGAGGTCAGAATGTGGCCTGTATAGTGACAACTGGAGGCAGTGGATTGTGCGCCGAGTGAAGCAGCGCCGAGTGGATGACAGTGGATGACAGTGGATGACAGTGGATGACAGTGGATGACAGTGGATGacagtgtgtttgtctgtgtgataGGTTTATCAGAAAGTGCACTTGTCTACATGGAGTCACAGTCCCCCTCCATGAGTTCATCTCTGTGTGTCCTGAatagcagggagagaggagagaata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1663605 True 1190 lncRNA 0.45 1 45093095 45094284

Neighbor

gene id symbol gene type direction distance location
LOC110493949 LOC106565235 coding upstream 5346 45079606 ~ 45087749 (+)
LOC110493947 LOC106565236 coding upstream 23684 45063682 ~ 45069411 (+)
LOC110493946 LOC106565237 coding upstream 64003 44969478 ~ 45029092 (+)
LOC110493942 bin2 coding upstream 162939 44895963 ~ 44930156 (+)
LOC118940467 NA coding upstream 234824 44847117 ~ 44858271 (+)
trnaq-uug-4 NA coding downstream 259194 45353478 ~ 45353549 (+)
LOC110493956 LOC106565228 coding downstream 424442 45518726 ~ 45526398 (+)
e3 e3 coding downstream 472970 45567254 ~ 45572753 (+)
LOC110493964 LOC106565225 coding downstream 659485 45753769 ~ 45827044 (+)
dlgap4b LOC106565221 coding downstream 1070194 46164478 ~ 46239382 (+)
G1453913 NA non-coding upstream 1760 45087756 ~ 45091335 (+)
G1453885 NA non-coding upstream 43881 45045996 ~ 45049214 (+)
G1453879 NA non-coding upstream 50179 45042433 ~ 45042916 (+)
G1453667 NA non-coding upstream 61624 45031217 ~ 45031471 (+)
G1453666 NA non-coding upstream 63531 45029367 ~ 45029564 (+)
G1453990 NA non-coding downstream 78506 45172790 ~ 45172996 (+)
G1454023 NA non-coding downstream 118253 45212537 ~ 45212737 (+)
G1454024 NA non-coding downstream 118557 45212841 ~ 45213162 (+)
G1454040 NA non-coding downstream 148681 45242965 ~ 45243316 (+)
G1454048 NA non-coding downstream 156889 45251173 ~ 45255211 (+)
G1453914 NA other upstream 22170 45069971 ~ 45070925 (+)
G1453889 NA other upstream 42090 45050729 ~ 45051005 (+)
G1453605 LOC106565239 other upstream 238356 44835997 ~ 44854739 (+)
G1452804 LOC105896813 other upstream 572618 44513069 ~ 44520477 (+)
G1452399 NA other upstream 1486314 43606313 ~ 43606781 (+)
G1454049 NA other downstream 164191 45258475 ~ 45259571 (+)
G1454127 NA other downstream 241010 45335294 ~ 45336523 (+)
G1454824 NA other downstream 761965 45856249 ~ 45858501 (+)
G1456570 NA other downstream 2133935 47228219 ~ 47228796 (+)
LOC100135862 LOC106565314 other downstream 2711074 47805358 ~ 47807518 (+)

Expression


Co-expression Network