G1454087


Basic Information

Item Value
gene id G1454087
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 45304469 ~ 45304717 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1663782
tttcagttctttccacaaattctcgattagattcaggtctggactttgacttggccattctaacacctggatatgtttatttttgaaccattccattgtagattttgctttatgttttggatcattgtcttgttggaagacaaatctccgtcccagtctcaggtcttttgcagactccatcaggttttcttccagaatggtcctgtatttggctccatccatctttccatcaattttaaccatcttccc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1663782 True 249 lncRNA 0.39 1 45304469 45304717

Neighbor

gene id symbol gene type direction distance location
LOC110493949 LOC106565235 coding upstream 216720 45079606 ~ 45087749 (+)
LOC110493947 LOC106565236 coding upstream 235058 45063682 ~ 45069411 (+)
LOC110493946 LOC106565237 coding upstream 275377 44969478 ~ 45029092 (+)
LOC110493942 bin2 coding upstream 374313 44895963 ~ 44930156 (+)
LOC118940467 NA coding upstream 446198 44847117 ~ 44858271 (+)
trnaq-uug-4 NA coding downstream 48761 45353478 ~ 45353549 (+)
LOC110493956 LOC106565228 coding downstream 214009 45518726 ~ 45526398 (+)
e3 e3 coding downstream 262537 45567254 ~ 45572753 (+)
LOC110493964 LOC106565225 coding downstream 449052 45753769 ~ 45827044 (+)
dlgap4b LOC106565221 coding downstream 859761 46164478 ~ 46239382 (+)
G1454084 NA non-coding upstream 2991 45301135 ~ 45301478 (+)
G1454080 NA non-coding upstream 8092 45296172 ~ 45296377 (+)
G1454074 NA non-coding upstream 15849 45288391 ~ 45288620 (+)
G1454048 NA non-coding upstream 49258 45251173 ~ 45255211 (+)
G1454040 NA non-coding upstream 61153 45242965 ~ 45243316 (+)
G1454090 LOC106600457 non-coding downstream 1615 45306332 ~ 45306619 (+)
G1454096 NA non-coding downstream 6886 45311603 ~ 45311875 (+)
G1454097 NA non-coding downstream 7253 45311970 ~ 45312254 (+)
G1454098 NA non-coding downstream 8046 45312763 ~ 45312967 (+)
G1454100 NA non-coding downstream 9000 45313717 ~ 45313947 (+)
G1454049 NA other upstream 44898 45258475 ~ 45259571 (+)
G1453914 NA other upstream 233544 45069971 ~ 45070925 (+)
G1453889 NA other upstream 253464 45050729 ~ 45051005 (+)
G1453605 LOC106565239 other upstream 449730 44835997 ~ 44854739 (+)
G1452804 LOC105896813 other upstream 783992 44513069 ~ 44520477 (+)
G1454127 NA other downstream 30577 45335294 ~ 45336523 (+)
G1454824 NA other downstream 551532 45856249 ~ 45858501 (+)
G1456570 NA other downstream 1923502 47228219 ~ 47228796 (+)
LOC100135862 LOC106565314 other downstream 2500641 47805358 ~ 47807518 (+)
G1456969 NA other downstream 2528863 47833580 ~ 47839370 (+)

Expression


Co-expression Network