G1454097


Basic Information

Item Value
gene id G1454097
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 45311970 ~ 45312254 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1663792
tgatcactctggatgaactgcagagatctacagctgaggtgggagactctgtccatagaacaacaatcattcgtatattgcacaaatctggcctttatggaagagtggcaagaagaaagccatttcttaaagatatccataaaaagtgtcgtttaaagtttgccacaagccacctgggagacacaccaaacatgtggaagaaggtgctccggtcagatgaaaccaaaattgaactttctggcaacaatgcaaaacgttatgtttggcgtaaaagcaacacagctg

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1663792 True 285 lncRNA 0.42 1 45311970 45312254

Neighbor

gene id symbol gene type direction distance location
LOC110493949 LOC106565235 coding upstream 224221 45079606 ~ 45087749 (+)
LOC110493947 LOC106565236 coding upstream 242559 45063682 ~ 45069411 (+)
LOC110493946 LOC106565237 coding upstream 282878 44969478 ~ 45029092 (+)
LOC110493942 bin2 coding upstream 381814 44895963 ~ 44930156 (+)
LOC118940467 NA coding upstream 453699 44847117 ~ 44858271 (+)
trnaq-uug-4 NA coding downstream 41224 45353478 ~ 45353549 (+)
LOC110493956 LOC106565228 coding downstream 206472 45518726 ~ 45526398 (+)
e3 e3 coding downstream 255000 45567254 ~ 45572753 (+)
LOC110493964 LOC106565225 coding downstream 441515 45753769 ~ 45827044 (+)
dlgap4b LOC106565221 coding downstream 852224 46164478 ~ 46239382 (+)
G1454096 NA non-coding upstream 95 45311603 ~ 45311875 (+)
G1454090 LOC106600457 non-coding upstream 5351 45306332 ~ 45306619 (+)
G1454087 NA non-coding upstream 7253 45304469 ~ 45304717 (+)
G1454084 NA non-coding upstream 10492 45301135 ~ 45301478 (+)
G1454080 NA non-coding upstream 15593 45296172 ~ 45296377 (+)
G1454098 NA non-coding downstream 509 45312763 ~ 45312967 (+)
G1454100 NA non-coding downstream 1463 45313717 ~ 45313947 (+)
G1454102 NA non-coding downstream 4132 45316386 ~ 45316588 (+)
G1454104 NA non-coding downstream 7686 45319940 ~ 45320141 (+)
G1454105 NA non-coding downstream 7916 45320170 ~ 45320487 (+)
G1454049 NA other upstream 52399 45258475 ~ 45259571 (+)
G1453914 NA other upstream 241045 45069971 ~ 45070925 (+)
G1453889 NA other upstream 260965 45050729 ~ 45051005 (+)
G1453605 LOC106565239 other upstream 457231 44835997 ~ 44854739 (+)
G1452804 LOC105896813 other upstream 791493 44513069 ~ 44520477 (+)
G1454127 NA other downstream 23040 45335294 ~ 45336523 (+)
G1454824 NA other downstream 543995 45856249 ~ 45858501 (+)
G1456570 NA other downstream 1915965 47228219 ~ 47228796 (+)
LOC100135862 LOC106565314 other downstream 2493104 47805358 ~ 47807518 (+)
G1456969 NA other downstream 2521326 47833580 ~ 47839370 (+)

Expression


Co-expression Network