G1454116


Basic Information

Item Value
gene id G1454116
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 45323541 ~ 45323747 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1663811
atgtgaccagtttatttttggatgcaatgttcagacattcacagaagtagctacagcataacacaaaTCATCCAAACTGGAAAAATGTAAGCTACATTAGTCCTAGCACTATCTGAGGAAAAGTTGATGTTACACAAGTGGTCATATTTAGATAACAACAGAAtccacaatatgaattagctaatagcaattactatttataattca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1663811 True 207 lncRNA 0.32 1 45323541 45323747

Neighbor

gene id symbol gene type direction distance location
LOC110493949 LOC106565235 coding upstream 235792 45079606 ~ 45087749 (+)
LOC110493947 LOC106565236 coding upstream 254130 45063682 ~ 45069411 (+)
LOC110493946 LOC106565237 coding upstream 294449 44969478 ~ 45029092 (+)
LOC110493942 bin2 coding upstream 393385 44895963 ~ 44930156 (+)
LOC118940467 NA coding upstream 465270 44847117 ~ 44858271 (+)
trnaq-uug-4 NA coding downstream 29731 45353478 ~ 45353549 (+)
LOC110493956 LOC106565228 coding downstream 194979 45518726 ~ 45526398 (+)
e3 e3 coding downstream 243507 45567254 ~ 45572753 (+)
LOC110493964 LOC106565225 coding downstream 430022 45753769 ~ 45827044 (+)
dlgap4b LOC106565221 coding downstream 840731 46164478 ~ 46239382 (+)
G1454105 NA non-coding upstream 3054 45320170 ~ 45320487 (+)
G1454104 NA non-coding upstream 3400 45319940 ~ 45320141 (+)
G1454102 NA non-coding upstream 6953 45316386 ~ 45316588 (+)
G1454100 NA non-coding upstream 9594 45313717 ~ 45313947 (+)
G1454098 NA non-coding upstream 10574 45312763 ~ 45312967 (+)
G1454118 NA non-coding downstream 2574 45326321 ~ 45327491 (+)
G1454119 NA non-coding downstream 4571 45328318 ~ 45328613 (+)
G1454122 NA non-coding downstream 7017 45330764 ~ 45330963 (+)
G1454124 NA non-coding downstream 8134 45331881 ~ 45332102 (+)
G1454125 NA non-coding downstream 9648 45333395 ~ 45333614 (+)
G1454049 NA other upstream 63970 45258475 ~ 45259571 (+)
G1453914 NA other upstream 252616 45069971 ~ 45070925 (+)
G1453889 NA other upstream 272536 45050729 ~ 45051005 (+)
G1453605 LOC106565239 other upstream 468802 44835997 ~ 44854739 (+)
G1452804 LOC105896813 other upstream 803064 44513069 ~ 44520477 (+)
G1454127 NA other downstream 11547 45335294 ~ 45336523 (+)
G1454824 NA other downstream 532502 45856249 ~ 45858501 (+)
G1456570 NA other downstream 1904472 47228219 ~ 47228796 (+)
LOC100135862 LOC106565314 other downstream 2481611 47805358 ~ 47807518 (+)
G1456969 NA other downstream 2509833 47833580 ~ 47839370 (+)

Expression


Co-expression Network