G1454124


Basic Information

Item Value
gene id G1454124
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 45331881 ~ 45332102 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1663821
GTATTTTTGtttattcaaattgccatcgataaaatgcaattgtgttcattgtccatagctcaTTACTACCCATATCATAttcccactgccaccatggggaactctgttcacaacgttgacatcagcaaattgctcggccacacaacgccatacagacgaaccatcaaacaggaaaagcgtcaatacaggactaagattgaatcctactacaccggctctgac

Function

NR:

description
Transposable element Tcb2 transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1663821 True 222 lncRNA 0.42 1 45331881 45332102

Neighbor

gene id symbol gene type direction distance location
LOC110493949 LOC106565235 coding upstream 244132 45079606 ~ 45087749 (+)
LOC110493947 LOC106565236 coding upstream 262470 45063682 ~ 45069411 (+)
LOC110493946 LOC106565237 coding upstream 302789 44969478 ~ 45029092 (+)
LOC110493942 bin2 coding upstream 401725 44895963 ~ 44930156 (+)
LOC118940467 NA coding upstream 473610 44847117 ~ 44858271 (+)
trnaq-uug-4 NA coding downstream 21376 45353478 ~ 45353549 (+)
LOC110493956 LOC106565228 coding downstream 186624 45518726 ~ 45526398 (+)
e3 e3 coding downstream 235152 45567254 ~ 45572753 (+)
LOC110493964 LOC106565225 coding downstream 421667 45753769 ~ 45827044 (+)
dlgap4b LOC106565221 coding downstream 832376 46164478 ~ 46239382 (+)
G1454122 NA non-coding upstream 918 45330764 ~ 45330963 (+)
G1454119 NA non-coding upstream 3268 45328318 ~ 45328613 (+)
G1454118 NA non-coding upstream 4390 45326321 ~ 45327491 (+)
G1454116 NA non-coding upstream 8134 45323541 ~ 45323747 (+)
G1454105 NA non-coding upstream 11394 45320170 ~ 45320487 (+)
G1454125 NA non-coding downstream 1293 45333395 ~ 45333614 (+)
G1454128 NA non-coding downstream 4493 45336595 ~ 45336798 (+)
G1454129 NA non-coding downstream 4847 45336949 ~ 45338709 (+)
G1454130 NA non-coding downstream 6753 45338855 ~ 45339078 (+)
G1454189 NA non-coding downstream 103731 45435833 ~ 45436511 (+)
G1454049 NA other upstream 72310 45258475 ~ 45259571 (+)
G1453914 NA other upstream 260956 45069971 ~ 45070925 (+)
G1453889 NA other upstream 280876 45050729 ~ 45051005 (+)
G1453605 LOC106565239 other upstream 477142 44835997 ~ 44854739 (+)
G1452804 LOC105896813 other upstream 811404 44513069 ~ 44520477 (+)
G1454127 NA other downstream 3192 45335294 ~ 45336523 (+)
G1454824 NA other downstream 524147 45856249 ~ 45858501 (+)
G1456570 NA other downstream 1896117 47228219 ~ 47228796 (+)
LOC100135862 LOC106565314 other downstream 2473256 47805358 ~ 47807518 (+)
G1456969 NA other downstream 2501478 47833580 ~ 47839370 (+)

Expression


Co-expression Network