G1454130


Basic Information

Item Value
gene id G1454130
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 45338855 ~ 45339078 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1663827
AAAAAAGATGAAATGCCCTTACAAgtatgactttttgcaaatccaatcagttttccacctTGATTCAACATCACAGCTGTTTAAAGAAAACCGAGCCATGGATTACAGTTCCTCCTGGTCAATATACTACGTTCAGGGTGAGCAACCATCTAACATAATGTTGTCAAATTCTGAACTTACCCTTTAATGTTGTCCTTTAACTATGCTCAATCAAGgtttatgtt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1663827 True 224 lncRNA 0.36 1 45338855 45339078

Neighbor

gene id symbol gene type direction distance location
LOC110493949 LOC106565235 coding upstream 251106 45079606 ~ 45087749 (+)
LOC110493947 LOC106565236 coding upstream 269444 45063682 ~ 45069411 (+)
LOC110493946 LOC106565237 coding upstream 309763 44969478 ~ 45029092 (+)
LOC110493942 bin2 coding upstream 408699 44895963 ~ 44930156 (+)
LOC118940467 NA coding upstream 480584 44847117 ~ 44858271 (+)
trnaq-uug-4 NA coding downstream 14400 45353478 ~ 45353549 (+)
LOC110493956 LOC106565228 coding downstream 179648 45518726 ~ 45526398 (+)
e3 e3 coding downstream 228176 45567254 ~ 45572753 (+)
LOC110493964 LOC106565225 coding downstream 414691 45753769 ~ 45827044 (+)
dlgap4b LOC106565221 coding downstream 825400 46164478 ~ 46239382 (+)
G1454129 NA non-coding upstream 146 45336949 ~ 45338709 (+)
G1454128 NA non-coding upstream 2057 45336595 ~ 45336798 (+)
G1454125 NA non-coding upstream 5241 45333395 ~ 45333614 (+)
G1454124 NA non-coding upstream 6753 45331881 ~ 45332102 (+)
G1454122 NA non-coding upstream 7892 45330764 ~ 45330963 (+)
G1454189 NA non-coding downstream 96755 45435833 ~ 45436511 (+)
G1454110 NA non-coding downstream 109443 45448521 ~ 45448758 (+)
G1454109 NA non-coding downstream 112040 45451118 ~ 45451368 (+)
G1454112 NA non-coding downstream 114627 45453705 ~ 45454517 (+)
G1454114 NA non-coding downstream 144832 45483910 ~ 45491063 (+)
G1454127 NA other upstream 2332 45335294 ~ 45336523 (+)
G1454049 NA other upstream 79284 45258475 ~ 45259571 (+)
G1453914 NA other upstream 267930 45069971 ~ 45070925 (+)
G1453889 NA other upstream 287850 45050729 ~ 45051005 (+)
G1453605 LOC106565239 other upstream 484116 44835997 ~ 44854739 (+)
G1454824 NA other downstream 517171 45856249 ~ 45858501 (+)
G1456570 NA other downstream 1889141 47228219 ~ 47228796 (+)
LOC100135862 LOC106565314 other downstream 2466280 47805358 ~ 47807518 (+)
G1456969 NA other downstream 2494502 47833580 ~ 47839370 (+)
glrx LOC106565191 other downstream 2691836 48030892 ~ 48036585 (+)

Expression


Co-expression Network