G1454189


Basic Information

Item Value
gene id G1454189
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 45435833 ~ 45436511 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1663888
GCCAGCTGTAGGATTTCAACGGGGATATTGTGGATTGCTACTTTCGGGGATCCCTCAGGTTCCGGAGCGCATCTCTTTCTGCTGCAATGCTGGATACTGTGAATACACCCCATTGATCCTCTGGTTCTGTCTTCTCCTTTTTCAGATTTGATCCACAAGTCAGTTGTCCGGATATCCCAAGGACCTGCTTTCCGTCTTACTCCTTAGGCTCCCCTAGTTTTTTTCAATAGGGAATCACTCTTTTCCTCCTTTTCACGCTAGTACAGGGAAGCTGGGTCCTACCTTGCTTCTTTGACACCCCAAAACTCCTTTCCTCCCTGTGAGCCCTCACACCCCTGTCCAAGttgatcttcctctctctctactcagccAGGACTGGAACCGTCACAACATTAACTCAGTCCAGCCCCCCGTCTTTCCTTCACCACAcgtctctccctcttctttcagAAAGCACAGGGCCCGCTCTCTCGCACCCTCCTGCCGTCGCTCTTGCCGTTCCTGCACCCTTCTTTCTTCTGTCAGCCTGTACTTTtacaccattctctctccctcgctagcGGTTGTCCTTTCCCTCCCAGCATGCACAGACCCTTCACTCTCTGCACTTACACTCTTCTCTGGTtgccctctttctcccctttccGCCTTCAAAGAAACACCCTgctctctcattccc

Function

NR:

description
tensin-2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1663888 True 679 lncRNA 0.52 1 45435833 45436511

Neighbor

gene id symbol gene type direction distance location
trnaq-uug-4 NA coding upstream 82284 45353478 ~ 45353549 (+)
LOC110493949 LOC106565235 coding upstream 348084 45079606 ~ 45087749 (+)
LOC110493947 LOC106565236 coding upstream 366422 45063682 ~ 45069411 (+)
LOC110493946 LOC106565237 coding upstream 406741 44969478 ~ 45029092 (+)
LOC110493942 bin2 coding upstream 505677 44895963 ~ 44930156 (+)
LOC110493956 LOC106565228 coding downstream 82215 45518726 ~ 45526398 (+)
e3 e3 coding downstream 130743 45567254 ~ 45572753 (+)
LOC110493964 LOC106565225 coding downstream 317258 45753769 ~ 45827044 (+)
dlgap4b LOC106565221 coding downstream 727967 46164478 ~ 46239382 (+)
LOC110493969 LOC106565220 coding downstream 807250 46243761 ~ 46252957 (+)
G1454130 NA non-coding upstream 96755 45338855 ~ 45339078 (+)
G1454129 NA non-coding upstream 97124 45336949 ~ 45338709 (+)
G1454128 NA non-coding upstream 99035 45336595 ~ 45336798 (+)
G1454125 NA non-coding upstream 102219 45333395 ~ 45333614 (+)
G1454124 NA non-coding upstream 103731 45331881 ~ 45332102 (+)
G1454110 NA non-coding downstream 12010 45448521 ~ 45448758 (+)
G1454109 NA non-coding downstream 14607 45451118 ~ 45451368 (+)
G1454112 NA non-coding downstream 17194 45453705 ~ 45454517 (+)
G1454114 NA non-coding downstream 47399 45483910 ~ 45491063 (+)
G1454248 NA non-coding downstream 157869 45594380 ~ 45594636 (+)
G1454127 NA other upstream 99310 45335294 ~ 45336523 (+)
G1454049 NA other upstream 176262 45258475 ~ 45259571 (+)
G1453914 NA other upstream 364908 45069971 ~ 45070925 (+)
G1453889 NA other upstream 384828 45050729 ~ 45051005 (+)
G1453605 LOC106565239 other upstream 581094 44835997 ~ 44854739 (+)
G1454824 NA other downstream 419738 45856249 ~ 45858501 (+)
G1456570 NA other downstream 1791708 47228219 ~ 47228796 (+)
LOC100135862 LOC106565314 other downstream 2368847 47805358 ~ 47807518 (+)
G1456969 NA other downstream 2397069 47833580 ~ 47839370 (+)
glrx LOC106565191 other downstream 2594403 48030892 ~ 48036585 (+)

Expression


Co-expression Network