G1454109



Basic Information


Item Value
gene id G1454109
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 45451118 ~ 45451368 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1663804
GGTGAACAATTGTAAAAAGGCCTTTGTTTAATTCTAACATTTGGTTATTCAAATATGTAATACAAATCTCCAAACatattattttgttttataaCACACTCCAGGGCTAATTTCTTTagcatttttttctagatttagaACATTAAACATTTATAAAGCAAACAATCCATCAGCACAGCAAATACTTAAATTGTTTAAGAGTATGTTGCAGAACAGGGATTAAAATACTTTTTCAGAATAAAAAGATCTTA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1663804 True 251 lncRNA 0.27 1 45451118 45451368

Neighbor


gene id symbol gene type direction distance location
trnaq-uug-4 NA coding upstream 97569 45353478 ~ 45353549 (+)
LOC110493949 LOC106565235 coding upstream 363369 45079606 ~ 45087749 (+)
LOC110493947 LOC106565236 coding upstream 381707 45063682 ~ 45069411 (+)
LOC110493946 LOC106565237 coding upstream 422026 44969478 ~ 45029092 (+)
LOC110493942 bin2 coding upstream 520962 44895963 ~ 44930156 (+)
LOC110493956 LOC106565228 coding downstream 67358 45518726 ~ 45526398 (+)
e3 e3 coding downstream 115886 45567254 ~ 45572753 (+)
LOC110493964 LOC106565225 coding downstream 302401 45753769 ~ 45827044 (+)
dlgap4b LOC106565221 coding downstream 713110 46164478 ~ 46239382 (+)
LOC110493969 LOC106565220 coding downstream 792393 46243761 ~ 46252957 (+)
G1454110 NA non-coding upstream 2360 45448521 ~ 45448758 (+)
G1454189 NA non-coding upstream 14607 45435833 ~ 45436511 (+)
G1454130 NA non-coding upstream 112040 45338855 ~ 45339078 (+)
G1454129 NA non-coding upstream 112409 45336949 ~ 45338709 (+)
G1454128 NA non-coding upstream 114320 45336595 ~ 45336798 (+)
G1454112 NA non-coding downstream 2337 45453705 ~ 45454517 (+)
G1454114 NA non-coding downstream 32542 45483910 ~ 45491063 (+)
G1454248 NA non-coding downstream 143012 45594380 ~ 45594636 (+)
G1454554 NA non-coding downstream 159748 45611116 ~ 45611409 (+)
G1454561 NA non-coding downstream 164046 45615414 ~ 45615646 (+)
G1454127 NA other upstream 114595 45335294 ~ 45336523 (+)
G1454049 NA other upstream 191547 45258475 ~ 45259571 (+)
G1453914 NA other upstream 380193 45069971 ~ 45070925 (+)
G1453889 NA other upstream 400113 45050729 ~ 45051005 (+)
G1453605 LOC106565239 other upstream 596379 44835997 ~ 44854739 (+)
G1454824 NA other downstream 404881 45856249 ~ 45858501 (+)
G1456570 NA other downstream 1776851 47228219 ~ 47228796 (+)
LOC100135862 LOC106565314 other downstream 2353990 47805358 ~ 47807518 (+)
G1456969 NA other downstream 2382212 47833580 ~ 47839370 (+)
glrx LOC106565191 other downstream 2579546 48030892 ~ 48036585 (+)

Expression



Co-expression Network