G1454554


Basic Information

Item Value
gene id G1454554
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 45611116 ~ 45611409 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1664301
gtgctagctaatccaagtttatcattttaaaaggctaattgatcatcagaaaacctttttgcaattatgttaccacagctgaaaactgttgtcctgattaaagaagcaataacactggccttctttagactagttgaatatctgtaGTGTAAGAAgttgtggattcgattacaggttccaaattgccagaaacaaataactttcttctgaaactcgtcagtctatccgtgttctgagaaatgaaggctattccatgcgagagattgccaaggaactgaagatctcatacaacgc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1664301 True 294 lncRNA 0.37 1 45611116 45611409

Neighbor

gene id symbol gene type direction distance location
e3 e3 coding upstream 38363 45567254 ~ 45572753 (+)
LOC110493956 LOC106565228 coding upstream 84718 45518726 ~ 45526398 (+)
trnaq-uug-4 NA coding upstream 257567 45353478 ~ 45353549 (+)
LOC110493949 LOC106565235 coding upstream 523367 45079606 ~ 45087749 (+)
LOC110493947 LOC106565236 coding upstream 541705 45063682 ~ 45069411 (+)
LOC110493964 LOC106565225 coding downstream 142360 45753769 ~ 45827044 (+)
dlgap4b LOC106565221 coding downstream 553069 46164478 ~ 46239382 (+)
LOC110493969 LOC106565220 coding downstream 632352 46243761 ~ 46252957 (+)
LOC110493971 NA coding downstream 664398 46275807 ~ 46278239 (+)
LOC110493972 LOC106565215 coding downstream 691004 46302413 ~ 46346158 (+)
G1454248 NA non-coding upstream 16480 45594380 ~ 45594636 (+)
G1454114 NA non-coding upstream 120053 45483910 ~ 45491063 (+)
G1454112 NA non-coding upstream 156599 45453705 ~ 45454517 (+)
G1454109 NA non-coding upstream 159748 45451118 ~ 45451368 (+)
G1454110 NA non-coding upstream 162358 45448521 ~ 45448758 (+)
G1454561 NA non-coding downstream 4005 45615414 ~ 45615646 (+)
G1454613 NA non-coding downstream 55512 45666921 ~ 45713858 (+)
G1454621 NA non-coding downstream 64560 45675969 ~ 45684720 (+)
G1454697 NA non-coding downstream 108138 45719547 ~ 45720387 (+)
G1454708 NA non-coding downstream 113644 45725053 ~ 45725339 (+)
G1454127 NA other upstream 274593 45335294 ~ 45336523 (+)
G1454049 NA other upstream 351545 45258475 ~ 45259571 (+)
G1453914 NA other upstream 540191 45069971 ~ 45070925 (+)
G1453889 NA other upstream 560111 45050729 ~ 45051005 (+)
G1453605 LOC106565239 other upstream 756377 44835997 ~ 44854739 (+)
G1454824 NA other downstream 244840 45856249 ~ 45858501 (+)
G1456570 NA other downstream 1616810 47228219 ~ 47228796 (+)
LOC100135862 LOC106565314 other downstream 2193949 47805358 ~ 47807518 (+)
G1456969 NA other downstream 2222171 47833580 ~ 47839370 (+)
glrx LOC106565191 other downstream 2419505 48030892 ~ 48036585 (+)

Expression


Co-expression Network