G1454613


Basic Information

Item Value
gene id G1454613
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 45666921 ~ 45713858 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1664361
ttacaaaggagggtaGCTGTTCTGCGAGTGGTCTAATAAAAAAGTCAACAAAAGTAGATAGAGGggccgttactgcatcaatgcccgctacaataggGCGCCCTGGAGGTTGTGTAACATTCTTGTGTAATTTCGGCAAAGTATAGAAAGTGGCAATTTTAGGGTGTTGAATAGCCAAAAAAGCATGTTCTTTTTAGGTTATCTGACCAGAACTTAAATACCCATCTAGGACAGTAAAGATAGTATTCTGAAAttggcttcaccatgtttcatcgaaatgtacagctgtgtatctgactcttat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1664361 True 304 lncRNA 0.40 2 45666921 45713858

Neighbor

gene id symbol gene type direction distance location
e3 e3 coding upstream 94168 45567254 ~ 45572753 (+)
LOC110493956 LOC106565228 coding upstream 140523 45518726 ~ 45526398 (+)
trnaq-uug-4 NA coding upstream 313372 45353478 ~ 45353549 (+)
LOC110493949 LOC106565235 coding upstream 579172 45079606 ~ 45087749 (+)
LOC110493947 LOC106565236 coding upstream 597510 45063682 ~ 45069411 (+)
LOC110493964 LOC106565225 coding downstream 39911 45753769 ~ 45827044 (+)
dlgap4b LOC106565221 coding downstream 450620 46164478 ~ 46239382 (+)
LOC110493969 LOC106565220 coding downstream 529903 46243761 ~ 46252957 (+)
LOC110493971 NA coding downstream 561949 46275807 ~ 46278239 (+)
LOC110493972 LOC106565215 coding downstream 588555 46302413 ~ 46346158 (+)
G1454561 NA non-coding upstream 51275 45615414 ~ 45615646 (+)
G1454554 NA non-coding upstream 55512 45611116 ~ 45611409 (+)
G1454248 NA non-coding upstream 72285 45594380 ~ 45594636 (+)
G1454114 NA non-coding upstream 175858 45483910 ~ 45491063 (+)
G1454112 NA non-coding upstream 212404 45453705 ~ 45454517 (+)
G1454697 NA non-coding downstream 5689 45719547 ~ 45720387 (+)
G1454708 NA non-coding downstream 11195 45725053 ~ 45725339 (+)
G1454827 LOC106565224 non-coding downstream 154616 45868474 ~ 45869883 (+)
G1454953 NA non-coding downstream 338641 46052499 ~ 46052705 (+)
G1454961 NA non-coding downstream 348666 46062524 ~ 46062740 (+)
G1454127 NA other upstream 330398 45335294 ~ 45336523 (+)
G1454049 NA other upstream 407350 45258475 ~ 45259571 (+)
G1453914 NA other upstream 595996 45069971 ~ 45070925 (+)
G1453889 NA other upstream 615916 45050729 ~ 45051005 (+)
G1453605 LOC106565239 other upstream 812182 44835997 ~ 44854739 (+)
G1454824 NA other downstream 142391 45856249 ~ 45858501 (+)
G1456570 NA other downstream 1514361 47228219 ~ 47228796 (+)
LOC100135862 LOC106565314 other downstream 2091500 47805358 ~ 47807518 (+)
G1456969 NA other downstream 2119722 47833580 ~ 47839370 (+)
glrx LOC106565191 other downstream 2317056 48030892 ~ 48036585 (+)

Expression


Co-expression Network