G1454621


Basic Information

Item Value
gene id G1454621
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 45675969 ~ 45684720 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1664370
GCCCAGAGAAAGAGGAACAGcgaacagatccagagagagaggaacaacaaacagatccagagagggagggagggacaacagacagatccagagagggaggaacaacaaacagatccagagagagagggaaaacaaacagatccagagagggagggacaacaaacagatccagagagggagggacaacaaacagatccagagag

Function

NR:

description
remodeling and spacing factor 1 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1664370 True 203 lncRNA 0.51 4 45675969 45684720

Neighbor

gene id symbol gene type direction distance location
e3 e3 coding upstream 103216 45567254 ~ 45572753 (+)
LOC110493956 LOC106565228 coding upstream 149571 45518726 ~ 45526398 (+)
trnaq-uug-4 NA coding upstream 322420 45353478 ~ 45353549 (+)
LOC110493949 LOC106565235 coding upstream 588220 45079606 ~ 45087749 (+)
LOC110493947 LOC106565236 coding upstream 606558 45063682 ~ 45069411 (+)
LOC110493964 LOC106565225 coding downstream 69049 45753769 ~ 45827044 (+)
dlgap4b LOC106565221 coding downstream 479758 46164478 ~ 46239382 (+)
LOC110493969 LOC106565220 coding downstream 559041 46243761 ~ 46252957 (+)
LOC110493971 NA coding downstream 591087 46275807 ~ 46278239 (+)
LOC110493972 LOC106565215 coding downstream 617693 46302413 ~ 46346158 (+)
G1454561 NA non-coding upstream 60323 45615414 ~ 45615646 (+)
G1454554 NA non-coding upstream 64560 45611116 ~ 45611409 (+)
G1454248 NA non-coding upstream 81333 45594380 ~ 45594636 (+)
G1454114 NA non-coding upstream 184906 45483910 ~ 45491063 (+)
G1454112 NA non-coding upstream 221452 45453705 ~ 45454517 (+)
G1454697 NA non-coding downstream 34827 45719547 ~ 45720387 (+)
G1454708 NA non-coding downstream 40333 45725053 ~ 45725339 (+)
G1454827 LOC106565224 non-coding downstream 183754 45868474 ~ 45869883 (+)
G1454953 NA non-coding downstream 367779 46052499 ~ 46052705 (+)
G1454961 NA non-coding downstream 377804 46062524 ~ 46062740 (+)
G1454127 NA other upstream 339446 45335294 ~ 45336523 (+)
G1454049 NA other upstream 416398 45258475 ~ 45259571 (+)
G1453914 NA other upstream 605044 45069971 ~ 45070925 (+)
G1453889 NA other upstream 624964 45050729 ~ 45051005 (+)
G1453605 LOC106565239 other upstream 821230 44835997 ~ 44854739 (+)
G1454824 NA other downstream 171529 45856249 ~ 45858501 (+)
G1456570 NA other downstream 1543499 47228219 ~ 47228796 (+)
LOC100135862 LOC106565314 other downstream 2120638 47805358 ~ 47807518 (+)
G1456969 NA other downstream 2148860 47833580 ~ 47839370 (+)
glrx LOC106565191 other downstream 2346194 48030892 ~ 48036585 (+)

Expression


Co-expression Network