G1454824


Basic Information

Item Value
gene id G1454824
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 45856249 ~ 45858501 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1664577
gcaataatgaaaccgTCAGCCCAAGAGTCTTGACTGTCGGACCGAGTGCTTGAATCATACCGAGAATACTGTGTCTTTATATACCAAACTTAAAAATGCTTCAACCATGGCTGGCTCCACCATTCCCAGATAGATTGGGGGCGCACCATGAGCCACTTTGGGCTCATCCTGTCTTTATCTGCCCCTGGCGTTATCTTAACCCCTGACCCTGGCCTCATTTCCCAGGCCAGGATGTCTAAGGACCACTGAGGCCTTtgttctactcctctctctcccagctaaACATACACCGTATCTTGTCTATGGAATGCAGGCTCACTCAGACCAGAGACATATGTCTCACATGAACCACTAATCATAGAATGGAATGTGGATATTTGGTTTCTTATCACCGAGACATCAATCAGTTGTCAGCTTCAAGCCATTTCTAGTAAAAACCCATGTACTTGACACCCAGACTAGCTGCAGGAAGCTGGAGTTGACACCATAAAACTCAgcattagcaggacagaaataccttactgtttgttaagtaaataaaaatgaaatatccACCAAATAAGGTGAATACATAATATTTCTATCACAAGGTCCATTTGTAAGAACCAACTATCAGAACCTAACCAGAACCAGACCATTACATCCAGATGTCCTGCTCAAAATGAATTATTGCATTTGTTTGCATTTTCCCCCTGGATCTGATTTACGTTAGCATTTTGCATGGTATGTCAAATTATGGATTACTACCTTTTCTCAATGAGGTTAAACCTCCCTGAAATAACTGAACCAAGGCCGGGGGCCTGTTTTTTAATCAGAATGCACATTGGCAGTATGGCGGAATGGCACCCCAATTCTTCATGGCATCATCATTCAGTGGAAAACAATAAGATgtgcactaccattcaaaagtttgtggtcacttagaaatgttcttgtttttgcccattaaaataacatcaaattgatcagaaataatgtagacattgttaatgttgtaaatgactatagctggaaacaacagattttttatggaatatctacatacagtaggcgtacagaagcccattatcagcaaccagcactcctgtgttccaatggcacgttgtgttagcttatccaagtttatcattttaaaaggctaattgatcgttagaaaacttttttgcaattatgttagcacagcggaaaactgtccttctttagactagttgagtatcaggagcatcagcatttgtgggttcaattgcaggctcaaaatggccagaaacaaacaactttcttctgaaacttgtcagtctattattattctgttactattccatgagagaaattgccaagaaactgaagatctcgtacaacgctgtgtactactcccttcacagaacagagcaaacgggctctaaccagaatagaaagaggagtgggaggccccggtgcacaactgagcaagaggacaagtacattagagtgtctagtttgagaaacagacgcctcacaagtccttaactgacagcttcattaaatagtacccgcaaaacaccagtctcaatgtcaacagtgaagaggcagagttgcaaagaaaaatccatatcttagactggccaataaaataaaagattaagatgggcaaaataacacagacactggacagaggaagattgggaaaaaaaatgtatggacagactaatctatgtttgaggtgttcggatcacaaagaacattcgtgagatgcagaaGAAATGAAAaaatgctggaggagtgcttgaagccatctgtcaagcatggtgtaggcaatgtgatggtctgggggtgctttggtggtggtaaagtgggagatttgcaCAGgataaaagggatcttgaagaaggaaggccatcactccattttgcatagCCATGCCATActctgtggacggcgcttaattggagccaatttcctccaacaggacaatgacccaaagcacagctccaaaccatgcaataactatttaaggaagaagcagtcagctggtattctgtctataatggagtggccaggacagtcaccggatctcaaccccattgagttgttgtgggagcagcttgaccgtatggtacgtaagaagtgtccatcaagccaatccaacttgtgggatgTGCTTCAAGGAGCAAGGGGTGAAATCtattcagattacctcaacaaattgacaactagaatgccaaaggtctgcatggctgtacagtgccttgcgaaagtattcggcccccttgaact

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1664577 True 2253 TUCP 0.42 1 45856249 45858501

Neighbor

gene id symbol gene type direction distance location
LOC110493964 LOC106565225 coding upstream 29205 45753769 ~ 45827044 (+)
e3 e3 coding upstream 283496 45567254 ~ 45572753 (+)
LOC110493956 LOC106565228 coding upstream 329851 45518726 ~ 45526398 (+)
trnaq-uug-4 NA coding upstream 502700 45353478 ~ 45353549 (+)
LOC110493949 LOC106565235 coding upstream 768500 45079606 ~ 45087749 (+)
dlgap4b LOC106565221 coding downstream 305977 46164478 ~ 46239382 (+)
LOC110493969 LOC106565220 coding downstream 385260 46243761 ~ 46252957 (+)
LOC110493971 NA coding downstream 417306 46275807 ~ 46278239 (+)
LOC110493972 LOC106565215 coding downstream 443912 46302413 ~ 46346158 (+)
LOC110493973 LOC106565216 coding downstream 495429 46353930 ~ 46361034 (+)
G1454708 NA non-coding upstream 130910 45725053 ~ 45725339 (+)
G1454697 NA non-coding upstream 135862 45719547 ~ 45720387 (+)
G1454613 NA non-coding upstream 142391 45666921 ~ 45713858 (+)
G1454621 NA non-coding upstream 171529 45675969 ~ 45684720 (+)
G1454561 NA non-coding upstream 240603 45615414 ~ 45615646 (+)
G1454827 LOC106565224 non-coding downstream 9973 45868474 ~ 45869883 (+)
G1454953 NA non-coding downstream 193998 46052499 ~ 46052705 (+)
G1454961 NA non-coding downstream 204023 46062524 ~ 46062740 (+)
G1454966 NA non-coding downstream 210123 46068624 ~ 46068839 (+)
G1454977 NA non-coding downstream 229055 46087556 ~ 46087770 (+)
G1454127 NA other upstream 519726 45335294 ~ 45336523 (+)
G1454049 NA other upstream 596678 45258475 ~ 45259571 (+)
G1453914 NA other upstream 785324 45069971 ~ 45070925 (+)
G1453889 NA other upstream 805244 45050729 ~ 45051005 (+)
G1453605 LOC106565239 other upstream 1001510 44835997 ~ 44854739 (+)
G1456570 NA other downstream 1369718 47228219 ~ 47228796 (+)
LOC100135862 LOC106565314 other downstream 1946857 47805358 ~ 47807518 (+)
G1456969 NA other downstream 1975079 47833580 ~ 47839370 (+)
glrx LOC106565191 other downstream 2172413 48030892 ~ 48036585 (+)
LOC110494013 LOC106565177 other downstream 2530581 48389082 ~ 48424478 (+)

Expression


Co-expression Network