G1454953


Basic Information

Item Value
gene id G1454953
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 46052499 ~ 46052705 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1664714
GACATGgccgctgtcacacacacacacacacacacacacacacaaacacaccccaaagAAAGTCCTGACCAAAAATAGCCCAGCTATATTTTTCCCTGCCTCACTGGAATTGACTGGAGGAAGAAAATTACAATCTGGAGGTTATTCCGTTCAATCTCGACCGATGACAGATTTTGACAGGTTTTGTTAGACCAATAAAGCAGGTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1664714 True 207 lncRNA 0.45 1 46052499 46052705

Neighbor

gene id symbol gene type direction distance location
LOC110493964 LOC106565225 coding upstream 225455 45753769 ~ 45827044 (+)
e3 e3 coding upstream 479746 45567254 ~ 45572753 (+)
LOC110493956 LOC106565228 coding upstream 526101 45518726 ~ 45526398 (+)
trnaq-uug-4 NA coding upstream 698950 45353478 ~ 45353549 (+)
LOC110493949 LOC106565235 coding upstream 964750 45079606 ~ 45087749 (+)
dlgap4b LOC106565221 coding downstream 111773 46164478 ~ 46239382 (+)
LOC110493969 LOC106565220 coding downstream 191056 46243761 ~ 46252957 (+)
LOC110493971 NA coding downstream 223102 46275807 ~ 46278239 (+)
LOC110493972 LOC106565215 coding downstream 249708 46302413 ~ 46346158 (+)
LOC110493973 LOC106565216 coding downstream 301225 46353930 ~ 46361034 (+)
G1454827 LOC106565224 non-coding upstream 182616 45868474 ~ 45869883 (+)
G1454708 NA non-coding upstream 327160 45725053 ~ 45725339 (+)
G1454697 NA non-coding upstream 332112 45719547 ~ 45720387 (+)
G1454613 NA non-coding upstream 338641 45666921 ~ 45713858 (+)
G1454621 NA non-coding upstream 367779 45675969 ~ 45684720 (+)
G1454961 NA non-coding downstream 9819 46062524 ~ 46062740 (+)
G1454966 NA non-coding downstream 15919 46068624 ~ 46068839 (+)
G1454977 NA non-coding downstream 34851 46087556 ~ 46087770 (+)
G1454979 NA non-coding downstream 36779 46089484 ~ 46089696 (+)
G1454984 NA non-coding downstream 41580 46094285 ~ 46094485 (+)
G1454824 NA other upstream 193998 45856249 ~ 45858501 (+)
G1454127 NA other upstream 715976 45335294 ~ 45336523 (+)
G1454049 NA other upstream 792928 45258475 ~ 45259571 (+)
G1453914 NA other upstream 981574 45069971 ~ 45070925 (+)
G1453889 NA other upstream 1001494 45050729 ~ 45051005 (+)
G1456570 NA other downstream 1175514 47228219 ~ 47228796 (+)
LOC100135862 LOC106565314 other downstream 1752653 47805358 ~ 47807518 (+)
G1456969 NA other downstream 1780875 47833580 ~ 47839370 (+)
glrx LOC106565191 other downstream 1978209 48030892 ~ 48036585 (+)
LOC110494013 LOC106565177 other downstream 2336377 48389082 ~ 48424478 (+)

Expression


Co-expression Network