G1454977


Basic Information

Item Value
gene id G1454977
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 46087556 ~ 46087770 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1664739
AATtgacagagaagagaacagagctTAACTCACAGTACTTTTGTCACCCTACAGACGTTCATGCAGGTCAGACATTTTGATTCCTGCAACTTATGGAAAAGAGACCATTTTAATGTTTCTTAAACATCTAAACAACTCTCAAAGTTGAGCAGGTCGGCTCTATTTTCAAACATCACTTTCATTGTAGAATAACTTCAATTCTGTGCGTTCCACAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1664739 True 215 lncRNA 0.38 1 46087556 46087770

Neighbor

gene id symbol gene type direction distance location
LOC110493964 LOC106565225 coding upstream 260512 45753769 ~ 45827044 (+)
e3 e3 coding upstream 514803 45567254 ~ 45572753 (+)
LOC110493956 LOC106565228 coding upstream 561158 45518726 ~ 45526398 (+)
trnaq-uug-4 NA coding upstream 734007 45353478 ~ 45353549 (+)
LOC110493949 LOC106565235 coding upstream 999807 45079606 ~ 45087749 (+)
dlgap4b LOC106565221 coding downstream 76708 46164478 ~ 46239382 (+)
LOC110493969 LOC106565220 coding downstream 155991 46243761 ~ 46252957 (+)
LOC110493971 NA coding downstream 188037 46275807 ~ 46278239 (+)
LOC110493972 LOC106565215 coding downstream 214643 46302413 ~ 46346158 (+)
LOC110493973 LOC106565216 coding downstream 266160 46353930 ~ 46361034 (+)
G1454966 NA non-coding upstream 18717 46068624 ~ 46068839 (+)
G1454961 NA non-coding upstream 24816 46062524 ~ 46062740 (+)
G1454953 NA non-coding upstream 34851 46052499 ~ 46052705 (+)
G1454827 LOC106565224 non-coding upstream 217673 45868474 ~ 45869883 (+)
G1454708 NA non-coding upstream 362217 45725053 ~ 45725339 (+)
G1454979 NA non-coding downstream 1714 46089484 ~ 46089696 (+)
G1454984 NA non-coding downstream 6515 46094285 ~ 46094485 (+)
G1455038 NA non-coding downstream 70864 46158634 ~ 46159039 (+)
G1455039 NA non-coding downstream 73027 46160797 ~ 46161020 (+)
G1455040 NA non-coding downstream 74532 46162302 ~ 46162503 (+)
G1454824 NA other upstream 229055 45856249 ~ 45858501 (+)
G1454127 NA other upstream 751033 45335294 ~ 45336523 (+)
G1454049 NA other upstream 827985 45258475 ~ 45259571 (+)
G1453914 NA other upstream 1016631 45069971 ~ 45070925 (+)
G1453889 NA other upstream 1036551 45050729 ~ 45051005 (+)
G1456570 NA other downstream 1140449 47228219 ~ 47228796 (+)
LOC100135862 LOC106565314 other downstream 1717588 47805358 ~ 47807518 (+)
G1456969 NA other downstream 1745810 47833580 ~ 47839370 (+)
glrx LOC106565191 other downstream 1943144 48030892 ~ 48036585 (+)
LOC110494013 LOC106565177 other downstream 2301312 48389082 ~ 48424478 (+)

Expression


Co-expression Network