G1455056


Basic Information

Item Value
gene id G1455056
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 46179465 ~ 46180094 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1664818
cagctccttcaggcttatctttggtctctttgttgcctctctgattaatgccctccttgcctggttttggtgggcggccctctcttggcaggtttattgtggtgccatattctttcaattttttaataatggatttaatggtgctccgtgggatgttcaaagtttcagatatttttttataacccaaccctggtctgtacttctccacaactttgtccctgacctgtttggagagctccctGGTCTTCATAGTGTCACTTGCTTGGTGATGCCCCTTGATTAGTGGTGtttcagactctggggcctttcagaacaggtgtatatatactgagatcatgtaaaagatcatgtgacacttagattgcacacaggtggacattatttaactaattatgtgacttctgaaggtaattggttgcaccagatcttatttaggggcttcatagctaACGGGATGAATAAATATGCACCCACCACTTTAcagtttttacatttttatttcacttcaccaatttggattattttgtttatgtccattacattCAATCCaattaaaaatctatttaaatacaggttgtaatgcaacaaaataggaacattcaccaaggggggtgaatacttttgcaaggc

Function

NR:

description
PREDICTED: high mobility group protein B2 isoform X1

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1664818 True 630 lncRNA 0.40 1 46179465 46180094

Neighbor

gene id symbol gene type direction distance location
LOC110493964 LOC106565225 coding upstream 352421 45753769 ~ 45827044 (+)
e3 e3 coding upstream 606712 45567254 ~ 45572753 (+)
LOC110493956 LOC106565228 coding upstream 653067 45518726 ~ 45526398 (+)
trnaq-uug-4 NA coding upstream 825916 45353478 ~ 45353549 (+)
LOC110493949 LOC106565235 coding upstream 1091716 45079606 ~ 45087749 (+)
LOC110493969 LOC106565220 coding downstream 63667 46243761 ~ 46252957 (+)
LOC110493971 NA coding downstream 95713 46275807 ~ 46278239 (+)
LOC110493972 LOC106565215 coding downstream 122319 46302413 ~ 46346158 (+)
LOC110493973 LOC106565216 coding downstream 173836 46353930 ~ 46361034 (+)
tpra1 tpra1 coding downstream 182938 46363032 ~ 46375987 (+)
G1455053 NA non-coding upstream 2797 46176436 ~ 46176668 (+)
G1455040 NA non-coding upstream 16962 46162302 ~ 46162503 (+)
G1455039 NA non-coding upstream 18445 46160797 ~ 46161020 (+)
G1455038 NA non-coding upstream 20426 46158634 ~ 46159039 (+)
G1454984 NA non-coding upstream 84980 46094285 ~ 46094485 (+)
G1455057 NA non-coding downstream 103 46180197 ~ 46180709 (+)
G1455060 NA non-coding downstream 4354 46184448 ~ 46184672 (+)
G1455066 NA non-coding downstream 13461 46193555 ~ 46193791 (+)
G1455067 NA non-coding downstream 13766 46193860 ~ 46194208 (+)
G1455068 NA non-coding downstream 14283 46194377 ~ 46194596 (+)
G1454824 NA other upstream 320964 45856249 ~ 45858501 (+)
G1454127 NA other upstream 842942 45335294 ~ 45336523 (+)
G1454049 NA other upstream 919894 45258475 ~ 45259571 (+)
G1453914 NA other upstream 1108540 45069971 ~ 45070925 (+)
G1453889 NA other upstream 1128460 45050729 ~ 45051005 (+)
G1456570 NA other downstream 1048125 47228219 ~ 47228796 (+)
LOC100135862 LOC106565314 other downstream 1625264 47805358 ~ 47807518 (+)
G1456969 NA other downstream 1653486 47833580 ~ 47839370 (+)
glrx LOC106565191 other downstream 1850820 48030892 ~ 48036585 (+)
LOC110494013 LOC106565177 other downstream 2208988 48389082 ~ 48424478 (+)

Expression


Co-expression Network