G1455060


Basic Information

Item Value
gene id G1455060
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 46184448 ~ 46184672 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1664822
ATTATGATCACAGTAGGCTACTTGACCACTGTCTGAAACTGTAAAGCTGGTACATCCTCAGTGTTCACAATAAACACCTGCTAGAATTTGCACATCCTTTTTTACAAAGTTCAAGTTtgtgctcagcagacctgaaatttgctcagtgaccAAAATAATTTAACATTGATAttggggattaagaagtgagtacATGCAATGGTCACAAATATTAAAGGTAAATGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1664822 True 225 lncRNA 0.36 1 46184448 46184672

Neighbor

gene id symbol gene type direction distance location
LOC110493964 LOC106565225 coding upstream 357404 45753769 ~ 45827044 (+)
e3 e3 coding upstream 611695 45567254 ~ 45572753 (+)
LOC110493956 LOC106565228 coding upstream 658050 45518726 ~ 45526398 (+)
trnaq-uug-4 NA coding upstream 830899 45353478 ~ 45353549 (+)
LOC110493949 LOC106565235 coding upstream 1096699 45079606 ~ 45087749 (+)
LOC110493969 LOC106565220 coding downstream 59089 46243761 ~ 46252957 (+)
LOC110493971 NA coding downstream 91135 46275807 ~ 46278239 (+)
LOC110493972 LOC106565215 coding downstream 117741 46302413 ~ 46346158 (+)
LOC110493973 LOC106565216 coding downstream 169258 46353930 ~ 46361034 (+)
tpra1 tpra1 coding downstream 178360 46363032 ~ 46375987 (+)
G1455057 NA non-coding upstream 3739 46180197 ~ 46180709 (+)
G1455056 NA non-coding upstream 4354 46179465 ~ 46180094 (+)
G1455053 NA non-coding upstream 7780 46176436 ~ 46176668 (+)
G1455040 NA non-coding upstream 21945 46162302 ~ 46162503 (+)
G1455039 NA non-coding upstream 23428 46160797 ~ 46161020 (+)
G1455066 NA non-coding downstream 8883 46193555 ~ 46193791 (+)
G1455067 NA non-coding downstream 9188 46193860 ~ 46194208 (+)
G1455068 NA non-coding downstream 9705 46194377 ~ 46194596 (+)
G1455069 NA non-coding downstream 11123 46195795 ~ 46196010 (+)
G1454824 NA other upstream 325947 45856249 ~ 45858501 (+)
G1454127 NA other upstream 847925 45335294 ~ 45336523 (+)
G1454049 NA other upstream 924877 45258475 ~ 45259571 (+)
G1453914 NA other upstream 1113523 45069971 ~ 45070925 (+)
G1453889 NA other upstream 1133443 45050729 ~ 45051005 (+)
G1456570 NA other downstream 1043547 47228219 ~ 47228796 (+)
LOC100135862 LOC106565314 other downstream 1620686 47805358 ~ 47807518 (+)
G1456969 NA other downstream 1648908 47833580 ~ 47839370 (+)
glrx LOC106565191 other downstream 1846242 48030892 ~ 48036585 (+)
LOC110494013 LOC106565177 other downstream 2204410 48389082 ~ 48424478 (+)

Expression


Co-expression Network