Gene
RNA
| Item | Value |
|---|---|
| gene id | G1455166 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 46381962 ~ 46386611 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1664934 | True | 617 | lncRNA | 0.44 | 2 | 46381962 | 46386611 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tpra1 | tpra1 | coding | upstream | 5975 | 46363032 ~ 46375987 (+) |
| LOC110493973 | LOC106565216 | coding | upstream | 20928 | 46353930 ~ 46361034 (+) |
| LOC110493972 | LOC106565215 | coding | upstream | 35804 | 46302413 ~ 46346158 (+) |
| LOC110493971 | NA | coding | upstream | 103995 | 46275807 ~ 46278239 (+) |
| LOC110493969 | LOC106565220 | coding | upstream | 129005 | 46243761 ~ 46252957 (+) |
| LOC110493976 | plxna1 | coding | downstream | 126067 | 46512678 ~ 46802202 (+) |
| LOC110493980 | LOC106565205 | coding | downstream | 723112 | 47109723 ~ 47134585 (+) |
| LOC110493981 | cytl1 | coding | downstream | 748553 | 47135164 ~ 47136870 (+) |
| LOC110493983 | LOC106565202 | coding | downstream | 900316 | 47286927 ~ 47308189 (+) |
| lyar | lyar | coding | downstream | 941691 | 47328302 ~ 47341231 (+) |
| G1455131 | NA | non-coding | upstream | 84242 | 46297509 ~ 46297720 (+) |
| G1455069 | NA | non-coding | upstream | 185952 | 46195795 ~ 46196010 (+) |
| G1455068 | NA | non-coding | upstream | 187366 | 46194377 ~ 46194596 (+) |
| G1455067 | NA | non-coding | upstream | 187754 | 46193860 ~ 46194208 (+) |
| G1455191 | NA | non-coding | downstream | 38802 | 46425413 ~ 46461287 (+) |
| G1455669 | NA | non-coding | downstream | 76775 | 46463386 ~ 46463600 (+) |
| G1455679 | NA | non-coding | downstream | 82592 | 46469203 ~ 46469462 (+) |
| G1455800 | NA | non-coding | downstream | 213397 | 46600008 ~ 46600165 (+) |
| G1455806 | NA | non-coding | downstream | 214112 | 46600723 ~ 46601041 (+) |
| G1454824 | NA | other | upstream | 523461 | 45856249 ~ 45858501 (+) |
| G1454127 | NA | other | upstream | 1045439 | 45335294 ~ 45336523 (+) |
| G1454049 | NA | other | upstream | 1122391 | 45258475 ~ 45259571 (+) |
| G1453914 | NA | other | upstream | 1311037 | 45069971 ~ 45070925 (+) |
| G1453889 | NA | other | upstream | 1330957 | 45050729 ~ 45051005 (+) |
| G1456570 | NA | other | downstream | 841608 | 47228219 ~ 47228796 (+) |
| LOC100135862 | LOC106565314 | other | downstream | 1418747 | 47805358 ~ 47807518 (+) |
| G1456969 | NA | other | downstream | 1446969 | 47833580 ~ 47839370 (+) |
| glrx | LOC106565191 | other | downstream | 1644303 | 48030892 ~ 48036585 (+) |
| LOC110494013 | LOC106565177 | other | downstream | 2002471 | 48389082 ~ 48424478 (+) |
