G1455810


Basic Information

Item Value
gene id G1455810
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 46603556 ~ 46605067 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1665626
ctCCTATTCCCTAGatcagttttttttgtgtgtgtgtctctctctttctctctctctttctctctctctctctctttctctctctctctctctttctctctctctctctttctctctctctctctttctctctctttctctctctctctctctttctttctctctctctctctttctctctccctctttctctctctctctctctctttctctttctctctttctctctttctctctctctctttctctctttctctctttctctctctctctttctctctctctctctttctctctctctctctttctctctctctctttctctctctctctctttctctctctttctctctctctctctttctctctctttctctctctttctctctctttctctttctctctctttctctctctttctctttctctctctttctctctctttctctctctttctctctctttctctctctttctctctttctctctctccctttctctctctctctctttctctctctttctctctctctttctctctctttctctctctttctctctttctctctctccctttctctctctctctctttctctctctctttctctctctttctctctcgttctctctctttctctctctctttctctctctttctctctcgttctctctcgttctctctctttctctctctctctctttctctctctctctttctctctctctttctctctctctttctctctttctctctctctctctctttctctctctctctttctctctctctctctctctttctctctctttctctctctctctttctctctctctctctctctctttctctctctttctctctttctctctctctctttctctctctctttctctctttctctctctctctctctctctctctctttctctttctacagTGGATTCTTCCCTCTGTTATTCGTTCTGGTTTCTCCCTCCTAAAACTGACACACAtgggtttgaaccaggatgttcGCATAGTAAGGGGCATAGCGGTATGCATATATTACGATTCACAAGGCTTGTGTGGTGGTACACTGACAACCACTCAGAGCACCCAGAACCACTGCCTCTTTGCAGTCTCAGTTGTCCAAACATCTGGCAGACATTTCACATCATCTGTAGTACAAACTCTGTATATCTCCATTTTTTAATTGAGCATTTAGCCTTCCCTACCTTTTCAATGGAGCCTTCCCTTAGGGCCGGCCCTTCTTTAACAGAGAGGCGGCCATGTTGACGCCAGTTGGAAGCAGTTTCTGTCCTCCCAGCAGGGTACAGTGGGCTTGACGAGCGACTGGGGGAGCCAACATGGTGAGCAGCAGCAGAAGGCTGTATTCCCCCAAGTACCTCCCTATCTCCATGTGCTGGGGGTGGATTAGGCTAATTAAAGCACTGCAAGCAGAGCCCCCGGAgagctgctacacacacacacacatgaacacacacggACATACAAGCACatgcatcacaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1665626 True 1512 lncRNA 0.45 1 46603556 46605067

Neighbor

gene id symbol gene type direction distance location
LOC110493975 chchd6 coding upstream 167030 46376260 ~ 46436526 (+)
tpra1 tpra1 coding upstream 227569 46363032 ~ 46375987 (+)
LOC110493973 LOC106565216 coding upstream 242522 46353930 ~ 46361034 (+)
LOC110493972 LOC106565215 coding upstream 257398 46302413 ~ 46346158 (+)
LOC110493971 NA coding upstream 325589 46275807 ~ 46278239 (+)
LOC110493980 LOC106565205 coding downstream 504656 47109723 ~ 47134585 (+)
LOC110493981 cytl1 coding downstream 530097 47135164 ~ 47136870 (+)
LOC110493983 LOC106565202 coding downstream 681860 47286927 ~ 47308189 (+)
lyar lyar coding downstream 723235 47328302 ~ 47341231 (+)
LOC110493987 LOC106565200 coding downstream 747165 47352232 ~ 47361786 (+)
G1455806 NA non-coding upstream 2515 46600723 ~ 46601041 (+)
G1455800 NA non-coding upstream 3391 46600008 ~ 46600165 (+)
G1455679 NA non-coding upstream 134094 46469203 ~ 46469462 (+)
G1455669 NA non-coding upstream 139956 46463386 ~ 46463600 (+)
G1455191 NA non-coding upstream 142269 46425413 ~ 46461287 (+)
G1455837 NA non-coding downstream 23455 46628522 ~ 46628737 (+)
G1455839 NA non-coding downstream 25842 46630909 ~ 46631116 (+)
G1455847 NA non-coding downstream 46566 46651633 ~ 46651833 (+)
G1455848 NA non-coding downstream 47005 46652072 ~ 46652650 (+)
G1455849 NA non-coding downstream 48234 46653301 ~ 46653553 (+)
G1454824 NA other upstream 745055 45856249 ~ 45858501 (+)
G1454127 NA other upstream 1267033 45335294 ~ 45336523 (+)
G1454049 NA other upstream 1343985 45258475 ~ 45259571 (+)
G1453914 NA other upstream 1532631 45069971 ~ 45070925 (+)
G1453889 NA other upstream 1552551 45050729 ~ 45051005 (+)
G1456570 NA other downstream 623152 47228219 ~ 47228796 (+)
LOC100135862 LOC106565314 other downstream 1200291 47805358 ~ 47807518 (+)
G1456969 NA other downstream 1228513 47833580 ~ 47839370 (+)
glrx LOC106565191 other downstream 1425847 48030892 ~ 48036585 (+)
LOC110494013 LOC106565177 other downstream 1784015 48389082 ~ 48424478 (+)

Expression


Co-expression Network