G1455848


Basic Information

Item Value
gene id G1455848
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 46652072 ~ 46652650 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1665665
gtgagagtgtgtgtgtgagagacattaCCCCAAACCACTGGTCTCACCCCAATCCTAACCTTCACTATTAGGCAACCACACTCCAAACTGGCCTCAGATCAGCGTACAGCGGCATTGGGCCACTTACATTCCACACCCTTGTCTGAGATGTAACAAGCTGCTGATTCCTAGTCATTTAGgcggaggggtagagagaggcctTTTATCACCACACTCCAAATTGACCTTAGATCAGTACTTGGCGTCTCTGAGATGAATTTGCGAACTTCATTCGTGTTTACAGATGGCCtaaaagtttgttattaaggcacatgaaagttcacatgtcaGAGAATTTTGTACGTTCAAGCCGCTCCCCTGTGAAGTCGCGACTGGCGACCGTACGGATAGTGACCCGAATCGGGTCGCATTTTACATGTGGAATCGCATGAGAAAAGGTCGGCAGTCAGACTTCTACAGTGGGTGGTCTCTAAAACTGATCCGCATTTGGTGCGACGTGTGTGAGACTTTTAGCAGTGGCAAAGAGAGTGTCTCTCTGACGGACAGCAGCTGGATCTCAACCTGCTGCagatggtgtgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1665665 True 579 lncRNA 0.49 1 46652072 46652650

Neighbor

gene id symbol gene type direction distance location
LOC110493975 chchd6 coding upstream 215546 46376260 ~ 46436526 (+)
tpra1 tpra1 coding upstream 276085 46363032 ~ 46375987 (+)
LOC110493973 LOC106565216 coding upstream 291038 46353930 ~ 46361034 (+)
LOC110493972 LOC106565215 coding upstream 305914 46302413 ~ 46346158 (+)
LOC110493971 NA coding upstream 374105 46275807 ~ 46278239 (+)
LOC110493980 LOC106565205 coding downstream 457073 47109723 ~ 47134585 (+)
LOC110493981 cytl1 coding downstream 482514 47135164 ~ 47136870 (+)
LOC110493983 LOC106565202 coding downstream 634277 47286927 ~ 47308189 (+)
lyar lyar coding downstream 675652 47328302 ~ 47341231 (+)
LOC110493987 LOC106565200 coding downstream 699582 47352232 ~ 47361786 (+)
G1455847 NA non-coding upstream 239 46651633 ~ 46651833 (+)
G1455839 NA non-coding upstream 20956 46630909 ~ 46631116 (+)
G1455837 NA non-coding upstream 23335 46628522 ~ 46628737 (+)
G1455810 NA non-coding upstream 47005 46603556 ~ 46605067 (+)
G1455806 NA non-coding upstream 51031 46600723 ~ 46601041 (+)
G1455849 NA non-coding downstream 651 46653301 ~ 46653553 (+)
G1455850 NA non-coding downstream 2392 46655042 ~ 46655265 (+)
G1455851 NA non-coding downstream 3391 46656041 ~ 46656241 (+)
G1455852 NA non-coding downstream 3659 46656309 ~ 46656539 (+)
G1455853 NA non-coding downstream 5239 46657889 ~ 46658136 (+)
G1454824 NA other upstream 793571 45856249 ~ 45858501 (+)
G1454127 NA other upstream 1315549 45335294 ~ 45336523 (+)
G1454049 NA other upstream 1392501 45258475 ~ 45259571 (+)
G1453914 NA other upstream 1581147 45069971 ~ 45070925 (+)
G1453889 NA other upstream 1601067 45050729 ~ 45051005 (+)
G1456570 NA other downstream 575569 47228219 ~ 47228796 (+)
LOC100135862 LOC106565314 other downstream 1152708 47805358 ~ 47807518 (+)
G1456969 NA other downstream 1180930 47833580 ~ 47839370 (+)
glrx LOC106565191 other downstream 1378264 48030892 ~ 48036585 (+)
LOC110494013 LOC106565177 other downstream 1736432 48389082 ~ 48424478 (+)

Expression


Co-expression Network